Evidence map›Paper›PMID 23152540›Full record

ArticleBlood2013

SOX4 enables oncogenic survival signals in acute lymphoblastic leukemia.

Parham Ramezani-Rad, Huimin Geng, Christian Hurtz, Lai N Chan, Zhengshan Chen, Hassan Jumaa, Ari Melnick, Elisabeth Paietta, William L Carroll, Cheryl L Willman and 2 more

Abstract read
In one paragraph

Article in Blood, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 2 pooled it
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 2 syntheses or guidelines pooled it, 89 citations in OpenAlex.

  1. SOX4 is a potential prognostic factor in human cancers: a systematic review and meta-analysis.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2016
    Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Transcriptome Analysis in Mexican Adults with Acute Lymphoblastic Leukemia.International journal of molecular sciences · 2024
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Parham Ramezani-RadDepartment of Laboratory Medicine, University of California, San Francisco, San Francisco, CA 94143, USA.
Huimin Geng
Christian Hurtz
Lai N Chan
Zhengshan Chen
Hassan Jumaa
Ari Melnick
Elisabeth Paietta
William L Carroll
Cheryl L Willman
Véronique Lefebvre
Markus Müschen
University of California, San Francisco · USAlbert Einstein College of Medicine · USCleveland Clinic Lerner College of Medicine · USMax Planck Institute of Immunobiology and Epigenetics · DENew York Proton Center · USNYU Langone Health · USUniversity of New Mexico · US

Funding

ECOG Specimen BankingU24CA114737 · NCI · FRONTIER SCI &TECHNOLOGY RSCH FDN, INC · PI COMIS, ROBERT L · 2005 to 2014
$9.3M
Targeted activation of autoimmune checkpoints in B cell malignanciesR01CA157644 · NCI · YALE UNIVERSITY · PI Markus Müschen · 2011 to 2026
$5.7M
MOLECULAR SIGNATURES FOR OUTCOME PREDICTION AND THERAPEUTIC TARGETING IN ALLU01CA157937 · NCI · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI HUNGER, STEPHEN PATRICK, WILLMAN, CHERYL LYNN · 2011 to 2015
$2.9M
PRE-B CELL RECEPTOR SIGNALING IN ACUTE LYMPHOBLASTIC LEUKEMIAR01CA137060 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MÜSCHEN, MARKUS · 2009 to 2016
$2.7M
ROLES OF SOX C GENES IN SKELETOGENESISR01AR054153 · NIAMS · CLEVELAND CLINIC LERNER COM-CWRU · PI LEFEBVRE, VERONIQUE M · 2006 to 2010
$1.6M
AID-mediated genetic instability in BCR-ABL1-transformed B cell lineage leukemiaR01CA139032 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MÜSCHEN, MARKUS · 2009 to 2013
$1.6M
Negative feedback signaling in tyrosine kinase-driven leukemiaR01CA172558 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MÜSCHEN, MARKUS · 2013 to 2015
$972k
Targeting BCL6 in tyrosine kinase-driven leukemiaR01CA169458 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MÜSCHEN, MARKUS · 2013 to 2015
$972k
Mechanism of BCL6-dependent stem cell maintenance in B cell lineage leukemiaR21CA152497 · NCI · CHILDREN'S HOSPITAL OF LOS ANGELES · PI MÜSCHEN, MARKUS · 2010 to 2011
$378k
NCI NIH HHS R01 CA137060NCI NIH HHS R01CA137060NCI NIH HHS R01 CA139032NCI NIH HHS R01CA139032NCI NIH HHS R01 CA157644NCI NIH HHS R01CA157644NCI NIH HHS R01 CA169458NCI NIH HHS R01CA169458NCI NIH HHS R01 CA172558NCI NIH HHS R21 CA152497NCI NIH HHS R21CA152497NCI NIH HHS U01 CA157937NCI NIH HHS U24 CA114737NIAMS NIH HHS R01 AR054153NIAMS NIH HHS R01AR54153
6 · The paper itself

Abstract

The Sox4 transcription factor mediates early B-cell differentiation. Compared with normal pre-B cells, SOX4 promoter regions in Ph(+) ALL cells are significantly hypomethylated. Loss and gain-of-function experiments identified Sox4 as a critical activator of PI3K/AKT and MAPK signaling in ALL cells. ChIP experiments confirmed that SOX4 binds to and transcriptionally activates promoters of multiple components within the PI3K/AKT and MAPK signaling pathways. Cre-mediated deletion of Sox4 had little effect on normal pre-B cells but compromised proliferation and viability of leukemia cells, which was rescued by BCL2L1 and constitutively active AKT and p110 PI3K. Consistent with these findings, high levels of SOX4 expression in ALL cells at the time of diagnosis predicted poor outcome in a pediatric clinical trial (COG P9906). Collectively, these studies identify SOX4 as a central mediator of oncogenic PI3K/AKT and MAPK signaling in ALL.

Indexed as

AnimalsBenzamidesB-LymphocytesCell SurvivalChildDNA MethylationGene Expression Regulation, LeukemicHumansImatinib MesylateKaplan-Meier EstimateMiceMice, Inbred NODMice, SCIDMulticenter Studies as TopicNeoplasm ProteinsPiperazinesBenzamidesImatinib MesylateNeoplasm ProteinsPiperazinesProtein Kinase InhibitorsPyrimidinesSOX4 protein, humanSox4 protein, mouseSOXC Transcription Factors

Identifiers

PMID23152540
PMCPMC3538327
OpenAlexW1965441887

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.