Evidence map›Paper›PMID 23151654›Full record

ArticleAnalytical and bioanalytical chemistry2013

The effect of optical substrates on micro-FTIR analysis of single mammalian cells.

Katia Wehbe, Jacob Filik, Mark D Frogley, Gianfelice Cinque

Abstract readEvaluation Study
In one paragraph

Article in Analytical and bioanalytical chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Evaluation of the Cytotoxic Effect of PdInternational journal of molecular sciences · 2023
    Article
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  6. Article
  7. Article
  8. Article
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  12. The Bouguer-Beer-Lambert Law: Shining Light on the Obscure.Chemphyschem : a European journal of chemical physics and physical chemistry · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Katia WehbeDiamond Light Source, Harwell Science and Innovation Campus, Didcot, Oxfordshire, UK. katia.wehbe@diamond.ac.uk
Jacob Filik
Mark D Frogley
Gianfelice Cinque

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The study of individual cells with infrared (IR) microspectroscopy often requires living cells to be cultured directly onto a suitable substrate. The surface effect of the specific substrates on the cell growth-viability and associated biochemistry-as well as on the IR analysis-spectral interference and optical artifacts-is all too often ignored. Using the IR beamline, MIRIAM (Diamond Light Source, UK), we show the importance of the substrate used for IR absorption spectroscopy by analyzing two different cell lines cultured on a range of seven optical substrates in both transmission and reflection modes. First, cell viability measurements are made to determine the preferable substrates for normal cell growth. Successively, synchrotron radiation IR microspectroscopy is performed on the two cell lines to determine any genuine biochemically induced changes or optical effect in the spectra due to the different substrates. Multivariate analysis of spectral data is applied on each cell line to visualize the spectral changes. The results confirm the advantage of transmission measurements over reflection due to the absence of a strong optical standing wave artifact which amplifies the absorbance spectrum in the high wavenumber regions with respect to low wavenumbers in the mid-IR range. The transmission spectra reveal interference from a more subtle but significant optical artifact related to the reflection losses of the different substrate materials. This means that, for comparative studies of cell biochemistry by IR microspectroscopy, it is crucial that all samples are measured on the same substrate type.

Indexed as

AnimalsCell LineCell ProliferationCellsCell SurvivalCHO CellsCricetinaeHumansMultivariate AnalysisSingle-Cell AnalysisSpectroscopy, Fourier Transform Infrared

Identifiers

PMID23151654
PMCPMC3548100

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.