Evidence map›Paper›PMID 23151485›Full record

ArticleGenes and immunity2013

Association of ANXA11 genetic variation with sarcoidosis in African Americans and European Americans.

A M Levin, M C Iannuzzi, C G Montgomery, S Trudeau, I Datta, P McKeigue, A Fischer, A Nebel, B A Rybicki

Open access · bronzeAbstract read
In one paragraph

Article in Genes and immunity, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 3 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 3 syntheses or guidelines pooled it, 66 citations in OpenAlex.

  1. Cells · 2022
    Pooled it
  2. Sarcoidosis as an Autoimmune Disease.Frontiers in immunology · 2019
    Pooled it
  3. Pooled it
  4. Article
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  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Immune mechanisms in fibrotic pulmonary sarcoidosis.European respiratory review : an official journal of the European Respiratory Society · 2022
    Review
  17. The Immunogenetics of Granulomatous Diseases.Advances in experimental medicine and biology · 2022
    Article
  18. Epigenetics and sarcoidosis.European respiratory review : an official journal of the European Respiratory Society · 2021
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

A M LevinDepartment of Public Health Sciences, Henry Ford Hospital, Detroit, MI 48202, USA.
M C Iannuzzi
C G Montgomery
S Trudeau
I Datta
P McKeigue
A Fischer
A Nebel
B A Rybicki
Henry Ford Hospital · USKiel University · DEOklahoma Medical Research Foundation · USSUNY Upstate Medical University · USUniversity of Edinburgh · GB

Funding

GENE-ENVIRONMENT INTERACTION IN PROSTATE CANCERR01ES011126 · NIEHS · HENRY FORD HEALTH SYSTEM · PI RYBICKI, BENJAMIN A. · 2000 to 2017
$8.0M
Admixture Mapping of Sarcoidosis Genes in African AmericanR01HL092576 · NHLBI · HENRY FORD HEALTH SYSTEM · PI RYBICKI, BENJAMIN A. · 2008 to 2011
$2.9M
African American Sarcoidosis Genetics ResourceRC2HL101499 · NHLBI · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI MONTGOMERY, COURTNEY · 2009 to 2010
$2.0M
Admixture Mapping of Sarcoidosis Genes in African AmericanR56AI072727 · NIAID · HENRY FORD HEALTH SYSTEM · PI RYBICKI, BENJAMIN A. · 2007 to 2007
$706k
NHLBI NIH HHS 1RC2HL101499NHLBI NIH HHS R01 HL092576NHLBI NIH HHS R01-HL092576NHLBI NIH HHS RC2 HL101499NIAID NIH HHS R56 AI072727NIAID NIH HHS R56-AI072727NIEHS NIH HHS R01 ES011126
6 · The paper itself

Abstract

A recent genome-wide association study in a German population and two subsequent studies in European populations found that a non-synonymous single-nucleotide polymorphism (SNP), rs1049550, within the annexin A11 (ANXA11) gene was associated with susceptibility to sarcoidosis. We sought to identify additional ANXA11 variants independently associated with sarcoidosis, determine whether any sarcoidosis-associated ANXA11 variants were associated with chest radiographic phenotypes, and explore human leukocyte antigen (HLA) SNP-SNP interactions with ANXA11. A total of 209 SNPs spanning 100 kb including the 5' promoter, coding, and 3' untranslated regions of ANXA11 were genotyped for 1689 sarcoidosis cases and 1252 controls. After adjustment for rs1049550, two additional novel ANXA11 sarcoidosis associations were identified only in African Americans--rs61860052 (odds ratio (OR)=0.62; 95% confidence interval (CI)=0.40-0.97) and rs4377299 (OR=1.31; 95% CI=1.06-1.63). These associations were more pronounced in radiologically-classified Scadding stage IV sarcoidosis cases. We also identified a significant SNP-SNP interaction between rs1049550 and a sarcoidosis risk SNP (rs9268839) near the HLA-DRA locus. This further genetic dissection of ANXA11 may provide additional insight into the immune dysregulation characteristic of sarcoidosis pathophysiology.

Indexed as

Polymorphism, Single NucleotideAnnexinsBlack or African AmericanCase-Control StudiesGenetic Association StudiesGenome, HumanHLA AntigensHumansPromoter Regions, GeneticSarcoidosisWhite PeopleAnnexinsHLA Antigens

Identifiers

PMID23151485
PMCPMC3595044
OpenAlexW2047366932

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.