Evidence map›Paper›PMID 23150908›Full record

ArticleThe New England journal of medicine2013

Variant of TREM2 associated with the risk of Alzheimer's disease.

Thorlakur Jonsson, Hreinn Stefansson, Stacy Steinberg, Ingileif Jonsdottir, Palmi V Jonsson, Jon Snaedal, Sigurbjorn Bjornsson, Johanna Huttenlocher, Allan I Levey, James J Lah and 14 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in The New England journal of medicine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04381468 (SEMA4D Blockade Safety and Brain Metabolic Activity in Alzheimer's Disease), which is not on this map. Cited by 1,534 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1,534citing papers in PubMed, 4 pooled it
76.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04381468 phase1 / phase2completednot on this mapstarted 2021, after this paper: background citation

SEMA4D Blockade Safety and Brain Metabolic Activity in Alzheimer's Disease (AD): A Multi-center, Randomized, Double-Blind, Placebo-Controlled Safety and Biomarker Study of Pepinemab Anti-SEMA4D Antibody in Early-AD

TypeinterventionalSponsorVaccinex Inc.Ran2021 to 2024Enrolled50ConditionsAlzheimer DiseaseArmsPepinemab, Placebo
3 · Its place in the literature

Who cites it

1,534 citing papers in PubMed, 4 syntheses or guidelines pooled it, 2,576 citations in OpenAlex.

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1,474 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 9 institutions in 6 countries.

Thorlakur JonssondeCODE Genetics, Reykjavik, Iceland.
Hreinn Stefansson
Stacy Steinberg
Ingileif Jonsdottir
Palmi V Jonsson
Jon Snaedal
Sigurbjorn Bjornsson
Johanna Huttenlocher
Allan I Levey
James J Lah
Dan Rujescu
Harald Hampel
Ina Giegling
Ole A Andreassen
Knut Engedal
Ingun Ulstein
Srdjan Djurovic
Carla Ibrahim-Verbaas
Albert Hofman
M Arfan Ikram
Cornelia M van Duijn
Unnur Thorsteinsdottir
Augustine Kong
Kari Stefansson
deCODE Genetics (Iceland) · ISErasmus MC · NLNational University Hospital of Iceland · ISEmory University · USOslo University Hospital · NOGoethe University Frankfurt · DEInstitute of Human Genetics · PLUniversity of Iceland · ISUniversity of Oslo · NO

Funding

National Centralized Repository for Alzheimer's Disease and Related Dementias (NCRAD)U24AG021886 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI TATIANA M. FOROUD · 2002 to 2026
$119.8M
Furthering scientific understanding of mechanisms underlying resilience to the effects of AD pathology by incorporating state of the art quantification of gliosis, inflammation, & synaptic toxicityU01AG006781 · NIA · UNIVERSITY OF WASHINGTON · PI CRANE, PAUL K, LARSON, ERIC B · 1986 to 2020
$39.3M
The Emory Alzheimer's Disease CenterP50AG025688 · NIA · EMORY UNIVERSITY · PI LEVEY, ALLAN I · 2005 to 2019
$25.7M
JH/CIDR Genotyping for Genome-Wide Association StudiesU01HG004438 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2007 to 2011
$24.2M
Vanderbilt Genome-Electronic Records ProjectU01HG004603 · NHGRI · VANDERBILT UNIVERSITY · PI RODEN, DAN M · 2007 to 2011
$7.3M
Development and Use of Network Infrastructure for High-Throughput GWA StudiesU01HG004610 · NHGRI · KAISER FOUNDATION HEALTH PLAN OF WASHINGTON · PI LARSON, ERIC B · 2007 to 2010
$4.2M
Genetic Discovery and Application in a Clinical Setting Continuing a PartnershipU01HG006375 · NHGRI · KAISER FOUNDATION HEALTH PLAN OF WASHINGTON · PI JARVIK, GAIL PAIRITZ, LARSON, ERIC B · 2011 to 2014
$4.1M
NHGRI NIH HHS U01 HG004438NHGRI NIH HHS U01HG004438NHGRI NIH HHS U01 HG004603NHGRI NIH HHS U01HG004603NHGRI NIH HHS U01 HG004610NHGRI NIH HHS U01HG004610NHGRI NIH HHS U01 HG006375NIA NIH HHS P50 AG025688NIA NIH HHS P50-AG025688NIA NIH HHS U01 AG006781NIA NIH HHS U01AG006781NIA NIH HHS U24 AG021886
6 · The paper itself

Abstract

backgroundSequence variants, including the ε4 allele of apolipoprotein E, have been associated with the risk of the common late-onset form of Alzheimer's disease. Few rare variants affecting the risk of late-onset Alzheimer's disease have been found.

methodsWe obtained the genome sequences of 2261 Icelanders and identified sequence variants that were likely to affect protein function. We imputed these variants into the genomes of patients with Alzheimer's disease and control participants and then tested for an association with Alzheimer's disease. We performed replication tests using case-control series from the United States, Norway, The Netherlands, and Germany. We also tested for a genetic association with cognitive function in a population of unaffected elderly persons.

resultsA rare missense mutation (rs75932628-T) in the gene encoding the triggering receptor expressed on myeloid cells 2 (TREM2), which was predicted to result in an R47H substitution, was found to confer a significant risk of Alzheimer's disease in Iceland (odds ratio, 2.92; 95% confidence interval [CI], 2.09 to 4.09; P=3.42×10(-10)). The mutation had a frequency of 0.46% in controls 85 years of age or older. We observed the association in additional sample sets (odds ratio, 2.90; 95% CI, 2.16 to 3.91; P=2.1×10(-12) in combined discovery and replication samples). We also found that carriers of rs75932628-T between the ages of 80 and 100 years without Alzheimer's disease had poorer cognitive function than noncarriers (P=0.003).

conclusionsOur findings strongly implicate variant TREM2 in the pathogenesis of Alzheimer's disease. Given the reported antiinflammatory role of TREM2 in the brain, the R47H substitution may lead to an increased predisposition to Alzheimer's disease through impaired containment of inflammatory processes. (Funded by the National Institute on Aging and others.).

Indexed as

Mutation, MissenseAged, 80 and overAlzheimer DiseaseApolipoprotein E4Case-Control StudiesCognitionGenetic VariationGenotyping TechniquesHeterozygoteHumansIcelandMembrane GlycoproteinsPolymorphism, Single NucleotideReceptors, ImmunologicRisk FactorsSequence Analysis, DNAApolipoprotein E4Membrane GlycoproteinsReceptors, ImmunologicTREM2 protein, human

Identifiers

PMID23150908
PMCPMC3677583
OpenAlexW2128613449

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.