Evidence map›Paper›PMID 23150553›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Catalytic control of enzymatic fluorine specificity.

Amy M Weeks, Michelle C Y Chang

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Enzymatic synthesis of fluorinated compounds.Applied microbiology and biotechnology · 2021
    Review
  4. Article
  5. Enhancing glycan stabilityChemical science · 2020
    Article
  6. Article
  7. Entropy drives selective fluorine recognition in the fluoroacetyl-CoA thioesterase fromProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  8. Article
  9. Fluorothreonyl-tRNA deacylase prevents mistranslation in the organofluorine producerProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  10. Engineered Fluorine Metabolism and Fluoropolymer Production in Living Cells.Angewandte Chemie (International ed. in English) · 2017
    Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Amy M WeeksDepartment of Chemistry, University of California, Berkeley, CA 94720, USA.
Michelle C Y Chang
University of California, Berkeley · US

Funding

Univ of Calif Berkeley Chemistry-Biology Interface ProgramT32GM066698 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI CHANG, CHRISTOPHER J., FRANCIS, MATTHEW B · 2004 to 2023
$7.5M
Discovery and mechanistic study of fluorine biochemistryDP2OD008696 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI CHANG, MICHELLE C · 2011 to 2011
$2.3M
500 MHz NMR SPECTROMETERS10RR016634 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI ELLMAN, JONATHAN A. · 2002 to 2002
$500k
600 MHz NMR Spectrometer for Solution-state NMRS10RR023679 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI ELLMAN, JONATHAN A · 2007 to 2007
$500k
NCRR NIH HHS 1S10RR023679-01NCRR NIH HHS S10 RR023679NCRR NIH HHS S10 RR16634-01NIGMS NIH HHS T32 GM066698NIH HHS 1 DP2 OD008696NIH HHS DP2 OD008696PHS HHS 1 T32 GMO66698
6 · The paper itself

Abstract

The investigation of unique chemical phenotypes has led to the discovery of enzymes with interesting behaviors that allow us to explore unusual function. The organofluorine-producing microbe Streptomyces cattleya has evolved a fluoroacetyl-CoA thioesterase (FlK) that demonstrates a surprisingly high level of discrimination for a single fluorine substituent on its substrate compared with the cellularly abundant hydrogen analog, acetyl-CoA. In this report, we show that the high selectivity of FlK is achieved through catalysis rather than molecular recognition, where deprotonation at the C(α) position to form a putative ketene intermediate only occurs on the fluorinated substrate, thereby accelerating the rate of hydrolysis 10(4)-fold compared with the nonfluorinated congener. These studies provide insight into mechanisms of catalytic selectivity in a native system where the existence of two reaction pathways determines substrate rather than product selection.

Indexed as

CatalysisFluorineHydrolysisKineticsFluorine

Identifiers

PMID23150553
PMCPMC3511759
OpenAlexW2019755960

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.