Evidence map›Paper›PMID 23145135›Full record

ArticlePloS one2012

Cell penetrable humanized-VH/V(H)H that inhibit RNA dependent RNA polymerase (NS5B) of HCV.

Kanyarat Thueng-in, Jeeraphong Thanongsaksrikul, Potjanee Srimanote, Kunan Bangphoomi, Ornnuthchar Poungpair, Santi Maneewatch, Kiattawee Choowongkomon, Wanpen Chaicumpa

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
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  9. Human Superantibodies to 3CLInternational journal of molecular sciences · 2022
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  10. VInternational journal of molecular sciences · 2022
    Review
  11. Review
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  15. Allosteric inhibition of LRRK2, where are we now.Biochemical Society transactions · 2020
    Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Kanyarat Thueng-inDepartment of Microbiology and Immunology, Faculty of Veterinary Medicine, Faculty of Science, Kasetsart University, Bangkok, Thailand.
Jeeraphong Thanongsaksrikul
Potjanee Srimanote
Kunan Bangphoomi
Ornnuthchar Poungpair
Santi Maneewatch
Kiattawee Choowongkomon
Wanpen Chaicumpa
Kasetsart University · THSiriraj Hospital · THThammasat University · THMahidol Oxford Tropical Medicine Research Unit · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

NS5B is pivotal RNA dependent RNA polymerase (RdRp) of HCV and NS5B function interfering halts the virus infective cycle. This work aimed to produce cell penetrable humanized single domain antibodies (SdAb; VH/V(H)H) that interfere with the RdRp activity. Recombinant NS5BΔ55 of genotype 3a HCV with de novo RNA synthetic activity was produced and used in phage biopanning for selecting phage clones that displayed NS5BΔ55 bound VH/V(H)H from a humanized-camel VH/V(H)H display library. VH/V(H)H from E. coli transfected with four selected phage clones inhibited RdRp activity when tested by ELISA inhibition using 3'di-cytidylate 25 nucleotide directed in vitro RNA synthesis. Deduced amino acid sequences of two clones showed V(H)H hallmark and were designated V(H)H6 and V(H)H24; other clones were conventional VH, designated VH9 and VH13. All VH/V(H)H were linked molecularly to a cell penetrating peptide, penetratin. The cell penetrable VH9, VH13, V(H)H6 and V(H)H24 added to culture of Huh7 cells transfected with JHF-1 RNA of genotype 2a HCV reduced the amounts of RNA intracellularly and in culture medium implying that they inhibited the virus replication. VH/V(H)H mimotopes matched with residues scattered on the polymerase fingers, palm and thumb which were likely juxtaposed to form conformational epitopes. Molecular docking revealed that the antibodies covered the RdRp catalytic groove. The transbodies await further studies for in vivo role in inhibiting HCV replication.

Indexed as

Amino Acid SequenceAnimalsAntibodies, Monoclonal, HumanizedAntiviral AgentsBinding SitesCamelusCell LineEpitopesEscherichia coliHepacivirusHumansMolecular Sequence DataPolymorphism, Restriction Fragment LengthRNA-Dependent RNA PolymeraseSequence AlignmentTransfectionAntibodies, Monoclonal, HumanizedAntiviral AgentsEpitopesNS-5 protein, hepatitis C virusRNA-Dependent RNA PolymeraseViral Nonstructural Proteins

Identifiers

PMID23145135
PMCPMC3493538
OpenAlexW1969341069

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.