Evidence map›Paper›PMID 23145031›Full record

ArticlePloS one2012

The hepatitis B virus x protein inhibits thymine DNA glycosylase initiated base excision repair.

Maarten A A van de Klundert, Formijn J van Hemert, Hans L Zaaijer, Neeltje A Kootstra

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Removal of Integrated Hepatitis B Virus DNA Using CRISPR-Cas9.Frontiers in cellular and infection microbiology · 2017
    Article
  9. Article
  10. Article
  11. Hepatitis B Virus X Protein and Hepatocarcinogenesis.International journal of molecular sciences · 2016
    Review
  12. Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Maarten A A van de KlundertDepartment of Blood-borne Infections, Center for Infection and Immunity Amsterdam (CINIMA), Sanquin, Amsterdam, The Netherlands.
Formijn J van Hemert
Hans L Zaaijer
Neeltje A Kootstra
Academic Medical Center · NLSanquin · NLUniversity of Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The hepatitis B virus (HBV) genome encodes the X protein (HBx), a ubiquitous transactivator that is required for HBV replication. Expression of the HBx protein has been associated with the development of HBV infection-related hepatocellular carcinoma (HCC). Previously, we generated a 3D structure of HBx by combined homology and ab initio in silico modelling. This structure showed a striking similarity to the human thymine DNA glycosylase (TDG), a key enzyme in the base excision repair (BER) pathway. To further explore this finding, we investigated whether both proteins interfere with or complement each other's functions. Here we show that TDG does not affect HBV replication, but that HBx strongly inhibits TDG-initiated base excision repair (BER), a major DNA repair pathway. Inhibition of the BER pathway may contribute substantially to the oncogenic effect of HBV infection.

Indexed as

DNA RepairCarcinoma, HepatocellularDNA ReplicationHEK293 CellsHepatitis BHep G2 CellsHumansLiver NeoplasmsThymine DNA GlycosylaseTrans-ActivatorsViral Regulatory and Accessory Proteinshepatitis B virus X proteinThymine DNA GlycosylaseTrans-ActivatorsViral Regulatory and Accessory Proteins

Identifiers

PMID23145031
PMCPMC3493593
OpenAlexW2050579879

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.