Evidence map›Paper›PMID 23144620›Full record

ArticlePLoS pathogens2012

Genome structure and reproductive behaviour influence the evolutionary potential of a fungal phytopathogen.

Guillaume Daverdin, Thierry Rouxel, Lilian Gout, Jean-Noël Aubertot, Isabelle Fudal, Michel Meyer, Francis Parlange, Julien Carpezat, Marie-Hélène Balesdent

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
10.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 155 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Breeding and management of major resistance genes to stem canker/blackleg in Brassica crops.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Efficacy of Blackleg Major Resistance Genes inPathogens (Basel, Switzerland) · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Genome-wide mapping of histone modifications during axenic growth in two species of Leptosphaeria maculans showing contrasting genomic organization.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2021
    Article
  16. Recent Findings Unravel Genes and Genetic Factors UnderlyingInternational journal of molecular sciences · 2020
    Review
  17. Article
  18. Generation and Characterization of a VirulentFrontiers in microbiology · 2020
    Article
  19. Repeat-Induced Point Mutations Drive Divergence betweenPathogens (Basel, Switzerland) · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Guillaume DaverdinINRA, UR 1290 Bioger, Campus AgroParisTech, Thiverval-Grignon, France.
Thierry Rouxel
Lilian Gout
Jean-Noël Aubertot
Isabelle Fudal
Michel Meyer
Francis Parlange
Julien Carpezat
Marie-Hélène Balesdent
AgroParisTech · FRAGroecologies, Innovations & Ruralities · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Modern agriculture favours the selection and spread of novel plant diseases. Furthermore, crop genetic resistance against pathogens is often rendered ineffective within a few years of its commercial deployment. Leptosphaeria maculans, the cause of phoma stem canker of oilseed rape, develops gene-for-gene interactions with its host plant, and has a high evolutionary potential to render ineffective novel sources of resistance in crops. Here, we established a four-year field experiment to monitor the evolution of populations confronted with the newly released Rlm7 resistance and to investigate the nature of the mutations responsible for virulence against Rlm7. A total of 2551 fungal isolates were collected from experimental crops of a Rlm7 cultivar or a cultivar without Rlm7. All isolates were phenotyped for virulence and a subset was genotyped with neutral genetic markers. Virulent isolates were investigated for molecular events at the AvrLm4-7 locus. Whilst virulent isolates were not found in neighbouring crops, their frequency had reached 36% in the experimental field after four years. An extreme diversity of independent molecular events leading to virulence was identified in populations, with large-scale Repeat Induced Point mutations or complete deletion of AvrLm4-7 being the most frequent. Our data suggest that increased mutability of fungal genes involved in the interactions with plants is directly related to their genomic environment and reproductive system. Thus, rapid allelic diversification of avirulence genes can be generated in L. maculans populations in a single field provided that large population sizes and sexual reproduction are favoured by agricultural practices.

Indexed as

Evolution, MolecularAscomycotaEpistasis, GeneticGenetic LociGenome, FungalPlant DiseasesPlants

Identifiers

PMID23144620
PMCPMC3493481
OpenAlexW2088347143

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.