Evidence map›Paper›PMID 23144248›Full record

ArticleJournal of bacteriology2013

The nitrogenase regulatory enzyme dinitrogenase reductase ADP-ribosyltransferase (DraT) is activated by direct interaction with the signal transduction protein GlnB.

Vivian R Moure, Karamatullah Danyal, Zhi-Yong Yang, Shannon Wendroth, Marcelo Müller-Santos, Fabio O Pedrosa, Marcelo Scarduelli, Edileusa C M Gerhardt, Luciano F Huergo, Emanuel M Souza and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. NADThe Journal of biological chemistry · 2020
    Article
  4. Review
  5. Genome Wide Phosphoproteome Analysis ofFrontiers in microbiology · 2019
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Vivian R MoureDepartment of Chemistry and Biochemistry, Utah State University, Logan, UT, USA.
Karamatullah Danyal
Zhi-Yong Yang
Shannon Wendroth
Marcelo Müller-Santos
Fabio O Pedrosa
Marcelo Scarduelli
Edileusa C M Gerhardt
Luciano F Huergo
Emanuel M Souza
Lance C Seefeldt
Universidade Federal do Paraná · BRUtah State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fe protein (dinitrogenase reductase) activity is reversibly inactivated by dinitrogenase reductase ADP-ribosyltransferase (DraT) in response to an increase in the ammonium concentration or a decrease in cellular energy in Azospirillum brasilense, Rhodospirillum rubrum, and Rhodobacter capsulatus. The ADP-ribosyl is removed by the dinitrogenase reductase-activating glycohydrolase (DraG), promoting Fe protein reactivation. The signaling pathway leading to DraT activation by ammonium is still not completely understood, but the available evidence shows the involvement of direct interaction between the enzyme and the nitrogen-signaling P(II) proteins. In A. brasilense, two P(II) proteins, GlnB and GlnZ, were identified. We used Fe protein from Azotobacter vinelandii as the substrate to assess the activity of A. brasilense DraT in vitro complexed or not with P(II) proteins. Under our conditions, GlnB was necessary for DraT activity in the presence of Mg-ADP. The P(II) effector 2-oxoglutarate, in the presence of Mg-ATP, inhibited DraT-GlnB activity, possibly by inducing complex dissociation. DraT was also activated by GlnZ and by both uridylylated P(II) proteins, but not by a GlnB variant carrying a partial deletion of the T loop. Kinetics studies revealed that the A. brasilense DraT-GlnB complex was at least 18-fold more efficient than DraT purified from R. rubrum, but with a similar K(m) value for NAD(+). Our results showed that ADP-ribosylation of the Fe protein does not affect the electronic state of its metal cluster and prevents association between the Fe and MoFe proteins, thus inhibiting electron transfer.

Indexed as

Adenosine DiphosphateADP Ribose TransferasesAzospirillum brasilenseAzotobacter vinelandiiBacterial ProteinsCoenzymesEnzyme InhibitorsKetoglutaric AcidsKineticsMagnesiumNADOxidoreductasesPII Nitrogen Regulatory ProteinsProtein BindingAdenosine DiphosphateADP Ribose TransferasesBacterial ProteinsCoenzymesdinitrogenase reductase ADP-ribosyltransferaseEnzyme InhibitorsKetoglutaric AcidsMagnesiumNADnitrogenase reductaseOxidoreductasesPIID regulatory protein, BacteriaPII Nitrogen Regulatory Proteins

Identifiers

PMID23144248
PMCPMC3553828
OpenAlexW2009127570

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.