Evidence map›Paper›PMID 23144243›Full record

ArticleJournal of bacteriology2013

Pseudomonas syringae pv. tomato DC3000 CmaL (PSPTO4723), a DUF1330 family member, is needed to produce L-allo-isoleucine, a precursor for the phytotoxin coronatine.

Jay N Worley, Alistair B Russell, Aaron G Wexler, Philip A Bronstein, Brian H Kvitko, Stuart B Krasnoff, Kathy R Munkvold, Bryan Swingle, Donna M Gibson, Alan Collmer

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 30 citations in OpenAlex.

  1. Shoot Maturation Strengthens FLS2-Mediated Resistance toMolecular plant-microbe interactions : MPMI · 2023
    Article
  2. Article
  3. Shared in planta population and transcriptomic features of nonpathogenic members of endophytic phyllosphere microbiota.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  4. Article
  5. Microbial Community Field Surveys Reveal AbundantFrontiers in microbiology · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. CaJournal of bacteriology · 2018
    Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Jay N WorleyDepartment of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, NY, USA.
Alistair B Russell
Aaron G Wexler
Philip A Bronstein
Brian H Kvitko
Stuart B Krasnoff
Kathy R Munkvold
Bryan Swingle
Donna M Gibson
Alan Collmer
Plant (United States) · USAgricultural Research Service · USIthaca College · USCornell University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pseudomonas syringae pv. tomato DC3000 produces the phytotoxin coronatine, a major determinant of the leaf chlorosis associated with DC3000 pathogenesis. The DC3000 PSPTO4723 (cmaL) gene is located in a genomic region encoding type III effectors; however, it promotes chlorosis in the model plant Nicotiana benthamiana in a manner independent of type III secretion. Coronatine is produced by the ligation of two moieties, coronafacic acid (CFA) and coronamic acid (CMA), which are produced by biosynthetic pathways encoded in separate operons. Cross-feeding experiments, performed in N. benthamiana with cfa, cma, and cmaL mutants, implicate CmaL in CMA production. Furthermore, analysis of bacterial supernatants under coronatine-inducing conditions revealed that mutants lacking either the cma operon or cmaL accumulate CFA rather than coronatine, supporting a role for CmaL in the regulation or biosynthesis of CMA. CmaL does not appear to regulate CMA production, since the expression of proteins with known roles in CMA production is unaltered in cmaL mutants. Rather, CmaL is needed for the first step in CMA synthesis, as evidenced by the fact that wild-type levels of coronatine production are restored to a ΔcmaL mutant when it is supplemented with 50 μg/ml l-allo-isoleucine, the starting unit for CMA production. cmaL is found in all other sequenced P. syringae strains with coronatine biosynthesis genes. This characterization of CmaL identifies a critical missing factor in coronatine production and provides a foundation for further investigation of a member of the widespread DUF1330 protein family.

Indexed as

Amino AcidsBacterial ProteinsGene DeletionIndenesIsoleucineMetabolic Networks and PathwaysNicotianaPlant DiseasesPseudomonas syringaeAmino AcidsBacterial ProteinscoronatineIndenesIsoleucine

Identifiers

PMID23144243
PMCPMC3553850
OpenAlexW2120775697

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.