Evidence map›Paper›PMID 23143777›Full record

ArticleChembiochem : a European journal of chemical biology2012

Targeting a regulatory element in human thymidylate synthase mRNA.

Nicholas D Brunn, Emily Garcia Sega, Melody B Kao, Thomas Hermann

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Functional conservation despite structural divergence in ligand-responsive RNA switches.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Nicholas D BrunnDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, 92093, USA.
Emily Garcia Sega
Melody B Kao
Thomas Hermann
University of California, San Diego · USIthaca College · US

Funding

Chemotherapy targeting human thymidylate synthase messenger RNAR01CA132753 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HERMANN, THOMAS C · 2009 to 2013
$1.6M
NCI NIH HHS CA132753NCI NIH HHS R01 CA132753
6 · The paper itself

Abstract

Thymidylate synthase (TS) is a key enzyme in the biosynthesis of thymidine. The use of TS inhibitors in cancer chemotherapy suffers from resistance development in tumors through upregulation of TS expression. Autoregulatory translation control has been implicated with TS overexpression. TS binding at its own mRNA, which leads to sequestration of the start codon, is abolished when the enzyme forms an inhibitor complex, thereby relieving translation suppression. We have used the protein-binding site from the TS mRNA in the context of a bicistronic expression system to validate targeting the regulatory motif with stabilizing ligands that prevent ribosomal initiation. Stabilization of the RNA by mutations, which were studied as surrogates of ligand binding, suppresses translation of the TS protein. Compounds that stabilize the TS-binding RNA motif and thereby inhibit ribosomal initiation might be used in combination with existing TS enzyme-targeting drugs to overcome resistance development during chemotherapy.

Indexed as

Base SequenceGenes, ReporterHumansInverted Repeat SequencesLigandsNucleotide MotifsPeptidesProtein BiosynthesisRegulatory Sequences, Ribonucleic AcidRNA, MessengerRNA StabilitySmall Molecule LibrariesThymidylate SynthaseLigandsPeptidesRegulatory Sequences, Ribonucleic AcidRNA, MessengerSmall Molecule LibrariesThymidylate Synthase

Identifiers

PMID23143777
PMCPMC3758747
OpenAlexW2130506846

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.