Evidence map›Paper›PMID 23143683›Full record

ArticleEukaryotic cell2013

Candida albicans induces arginine biosynthetic genes in response to host-derived reactive oxygen species.

Claudia Jiménez-López, John R Collette, Kimberly M Brothers, Kelly M Shepardson, Robert A Cramer, Robert T Wheeler, Michael C Lorenz

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 76 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. The Alleviating Effect of Arginine on Ethanol Stress inJournal of fungi (Basel, Switzerland) · 2025
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  9. Central Carbon Metabolism inJournal of fungi (Basel, Switzerland) · 2024
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  10. Article
  11. Article
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  14. Study of Dimorphism Transition Mechanism ofJournal of fungi (Basel, Switzerland) · 2022
    Article
  15. Role of Cellular Metabolism duringPathogens (Basel, Switzerland) · 2022
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Claudia Jiménez-LópezDepartment of Microbiology and Molecular Genetics, University of Texas Health Science Center at Houston, Houston, Texas, USA.
John R Collette
Kimberly M Brothers
Kelly M Shepardson
Robert A Cramer
Robert T Wheeler
Michael C Lorenz
The University of Texas Health Science Center at Houston · USDartmouth College · USUniversity of Maine · US

Funding

Roles of acetate metabolism in the virulence of Candida albicansR01AI075091 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI LORENZ, MICHAEL C · 2007 to 2017
$4.0M
Hypoxia Adaptation and Fungal Virulence of Aspergillus fumigatusR01AI081838 · NIAID · MONTANA STATE UNIVERSITY - BOZEMAN · PI CRAMER, ROBERT ANDREW · 2009 to 2017
$2.9M
Genetics and visualization of innate host response to C. albicans infection in viR15AI094406 · NIAID · UNIVERSITY OF MAINE ORONO · PI WHEELER, ROBERT T. · 2012 to 2012
$422k
Understanding Immunomodulation by Candida albicansR21AI071134 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI LORENZ, MICHAEL C · 2008 to 2009
$372k
NIAID NIH HHS L40 AI084526NIAID NIH HHS R01 AI075091NIAID NIH HHS R01AI075091NIAID NIH HHS R01 AI081838NIAID NIH HHS R01AI081838NIAID NIH HHS R15 AI094406NIAID NIH HHS R15AI094406NIAID NIH HHS R21 AI071134NIAID NIH HHS R21AI071134
6 · The paper itself

Abstract

The interaction of Candida albicans with phagocytes of the host's innate immune system is highly dynamic, and its outcome directly impacts the progression of infection. While the switch to hyphal growth within the macrophage is the most obvious physiological response, much of the genetic response reflects nutrient starvation: translational repression and induction of alternative carbon metabolism. Changes in amino acid metabolism are not seen, with the striking exception of arginine biosynthesis, which is upregulated in its entirety during coculture with macrophages. Using single-cell reporters, we showed here that arginine biosynthetic genes are induced specifically in phagocytosed cells. This induction is lower in magnitude than during arginine starvation in vitro and is driven not by an arginine deficiency within the phagocyte but instead by exposure to reactive oxygen species (ROS). Curiously, these genes are induced in a narrow window of sublethal ROS concentrations. C. albicans cells phagocytosed by primary macrophages deficient in the gp91(phox) subunit of the phagocyte oxidase do not express the ARG pathway, indicating that the induction is dependent on the phagocyte oxidative burst. C. albicans arg pathway mutants are retarded in germ tube and hypha formation within macrophages but are not notably more sensitive to ROS. We also find that the ARG pathway is regulated not by the general amino acid control response but by transcriptional regulators similar to the Saccharomyces cerevisiae ArgR complex. In summary, phagocytosis induces this single amino acid biosynthetic pathway in an ROS-dependent manner.

Indexed as

AnimalsArginaseArginineBasic-Leucine Zipper Transcription FactorsBiosynthetic PathwaysCandida albicansCells, CulturedEnzyme InductionFungal ProteinsGene Expression Regulation, FungalGenes, FungalHost-Pathogen InteractionsMacrophagesMiceMice, Inbred ICRPhagocytosisArginaseArginineBasic-Leucine Zipper Transcription FactorsFungal ProteinsReactive Oxygen Species

Identifiers

PMID23143683
PMCPMC3535846
OpenAlexW2118323304

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.