Evidence map›Paper›PMID 23143658›Full record

ArticleExtremophiles : life under extreme conditions2013

Extreme zinc tolerance in acidophilic microorganisms from the bacterial and archaeal domains.

Stefanie Mangold, Joanna Potrykus, Erik Björn, Lars Lövgren, Mark Dopson

Abstract read
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In one paragraph

Article in Extremophiles : life under extreme conditions, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
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  7. Review
  8. Forced Biomineralization: A Review.Biomimetics (Basel, Switzerland) · 2021
    Review
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  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Marine ArchaeonFrontiers in microbiology · 2019
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Stefanie MangoldMolecular Biology, Umeå University, SE-901 87, Umeå, Sweden. tefanie.mangold@molbiol.umu.se
Joanna Potrykus
Erik Björn
Lars Lövgren
Mark Dopson
Umeå University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Zinc can occur in extremely high concentrations in acidic, heavy metal polluted environments inhabited by acidophilic prokaryotes. Although these organisms are able to thrive in such severely contaminated ecosystems their resistance mechanisms have not been well studied. Bioinformatic analysis of a range of acidophilic bacterial and archaeal genomes identified homologues of several known zinc homeostasis systems. These included primary and secondary transporters, such as the primary heavy metal exporter ZntA and Nramp super-family secondary importer MntH. Three acidophilic model microorganisms, the archaeon 'Ferroplasma acidarmanus', the Gram negative bacterium Acidithiobacillus caldus, and the Gram positive bacterium Acidimicrobium ferrooxidans, were selected for detailed analyses. Zinc speciation modeling of the growth media demonstrated that a large fraction of the free metal ion is complexed, potentially affecting its toxicity. Indeed, many of the putative zinc homeostasis genes were constitutively expressed and with the exception of 'F. acidarmanus' ZntA, they were not up-regulated in the presence of excess zinc. Proteomic analysis revealed that zinc played a role in oxidative stress in At. caldus and Am. ferrooxidans. Furthermore, 'F. acidarmanus' kept a constant level of intracellular zinc over all conditions tested whereas the intracellular levels increased with increasing zinc exposure in the remaining organisms.

Indexed as

Models, BiologicalWater MicrobiologyAcidithiobacillusAdenosine TriphosphatasesArchaeal ProteinsBacterial ProteinsCation Transport ProteinsThermoplasmalesWater Pollutants, ChemicalZincAdenosine TriphosphatasesArchaeal ProteinsBacterial ProteinsCation Transport ProteinsMntH protein, bacteriaWater Pollutants, ChemicalZincZn(II)-translocating P-type ATPase

Identifiers

PMID23143658
OpenAlexW2085387977

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.