Evidence map›Paper›PMID 23143601›Full record

ArticleNature genetics2012

Genome-wide association analysis identifies new lung cancer susceptibility loci in never-smoking women in Asia.

Qing Lan, Chao A Hsiung, Keitaro Matsuo, Yun-Chul Hong, Adeline Seow, Zhaoming Wang, H Dean Hosgood, Kexin Chen, Jiu-Cun Wang, Nilanjan Chatterjee and 121 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 195 papers, 23 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
195citing papers in PubMed, 23 pooled it
20.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

195 citing papers in PubMed, 23 syntheses or guidelines pooled it, 348 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Pooled it
  7. Pooled it
  8. Pooled it
  9. Pooled it
  10. Pooled it
  11. Pooled it
  12. Pooled it
  13. Pooled it
  14. Pooled it
  15. Pooled it
  16. Pooled it
  17. Pooled it
  18. Pooled it
  19. Pooled it
  20. Quantitative assessment of common genetic variants on chromosome 5p15 and lung cancer risk.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it

135 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

131 authors at 20 institutions in 8 countries.

Qing LanDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD, USA.
Chao A Hsiung
Keitaro Matsuo
Yun-Chul Hong
Adeline Seow
Zhaoming Wang
H Dean Hosgood
Kexin Chen
Jiu-Cun Wang
Nilanjan Chatterjee
Wei Hu
Maria Pik Wong
Wei Zheng
Neil Caporaso
Jae Yong Park
Chien-Jen Chen
Yeul Hong Kim
Young Tae Kim
Maria Teresa Landi
Hongbing Shen
Charles Lawrence
Laurie Burdett
Meredith Yeager
Jeffrey Yuenger
Kevin B Jacobs
I-Shou Chang
Tetsuya Mitsudomi
Hee Nam Kim
Gee-Chen Chang
Bryan A Bassig
Margaret Tucker
Fusheng Wei
Zhihua Yin
Chen Wu
She-Juan An
Biyun Qian
Victor Ho Fun Lee
Daru Lu
Jianjun Liu
Hyo-Sung Jeon
Chin-Fu Hsiao
Jae Sook Sung
Jin Hee Kim
Yu-Tang Gao
Ying-Huang Tsai
Yoo Jin Jung
Huan Guo
Zhibin Hu
Amy Hutchinson
Wen-Chang Wang
Robert Klein
Charles C Chung
In-Jae Oh
Kuan-Yu Chen
Sonja I Berndt
Xingzhou He
Wei Wu
Jiang Chang
Xu-Chao Zhang
Ming-Shyan Huang
Hong Zheng
Junwen Wang
Xueying Zhao
Yuqing Li
Jin Eun Choi
Wu-Chou Su
Kyong Hwa Park
Sook Whan Sung
Xiao-Ou Shu
Yuh-Min Chen
Li Liu
Chang Hyun Kang
Lingmin Hu
Chung-Hsing Chen
William Pao
Young-Chul Kim
Tsung-Ying Yang
Jun Xu
Peng Guan
Wen Tan
Jian Su
Chih-Liang Wang
Haixin Li
Alan Dart Loon Sihoe
Zhenhong Zhao
Ying Chen
Yi Young Choi
Jen-Yu Hung
Jun Suk Kim
Ho-Il Yoon
Qiuyin Cai
Chien-Chung Lin
In Kyu Park
Ping Xu
Jing Dong
Christopher Kim
Qincheng He
Reury-Perng Perng
Takashi Kohno
Sun-Seog Kweon
Chih-Yi Chen
Roel Vermeulen
Junjie Wu
Wei-Yen Lim
Kun-Chieh Chen
Wong-Ho Chow
Bu-Tian Ji
John K C Chan
Minjie Chu
Yao-Jen Li
Jun Yokota
Jihua Li
Hongyan Chen
Yong-Bing Xiang
Chong-Jen Yu
Hideo Kunitoh
Guoping Wu
Li Jin
Yen-Li Lo
Kouya Shiraishi
Ying-Hsiang Chen
Hsien-Chih Lin
Tangchun Wu
Yi-Long Wu
Pan-Chyr Yang
Baosen Zhou
Min-Ho Shin
Joseph F Fraumeni
Dongxin Lin
Stephen J Chanock
Nathaniel Rothman
National Cancer Institute · USDivision of Cancer Epidemiology and GeneticsNational Health Research Institutes · TWSeoul National University · KRFudan University · CNChina Medical University · CNNanjing Medical University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNGenome Institute of Singapore · SGKyungpook National University Medical Center · KRTianjin Medical University Cancer Institute and Hospital · CNKorea University · KRNational Taiwan University Hospital · TWUniversity of Hong Kong · HKVanderbilt University · USChina National Environmental Monitoring Center · CNChonnam National University · KRChonnam National University Hwasun Hospital · KRGuangdong Academy of Medical Sciences · CNGuangdong General Hospital · CN

Funding

Cancer Risk Reduction and Diet: A Cohort Study of WomenR37CA070867 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ZHENG, WEI · 2009 to 2013
$4.7M
Overcoming acquired resistance to EGFR inhibitors in lung cancerR01CA121210 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI LOVLY, CHRISTINE M. · 2007 to 2016
$2.9M
Intramural NIH HHS Z99 CA999999NCI NIH HHS N02 CP1101066NCI NIH HHS R01-CA121210NCI NIH HHS R37 CA070867NCI NIH HHS R37 CA70867
6 · The paper itself

Abstract

To identify common genetic variants that contribute to lung cancer susceptibility, we conducted a multistage genome-wide association study of lung cancer in Asian women who never smoked. We scanned 5,510 never-smoking female lung cancer cases and 4,544 controls drawn from 14 studies from mainland China, South Korea, Japan, Singapore, Taiwan and Hong Kong. We genotyped the most promising variants (associated at P < 5 × 10(-6)) in an additional 1,099 cases and 2,913 controls. We identified three new susceptibility loci at 10q25.2 (rs7086803, P = 3.54 × 10(-18)), 6q22.2 (rs9387478, P = 4.14 × 10(-10)) and 6p21.32 (rs2395185, P = 9.51 × 10(-9)). We also confirmed associations reported for loci at 5p15.33 and 3q28 and a recently reported finding at 17q24.3. We observed no evidence of association for lung cancer at 15q25 in never-smoking women in Asia, providing strong evidence that this locus is not associated with lung cancer independent of smoking.

Indexed as

Genetic LociGenetic Predisposition to DiseaseGenome-Wide Association StudyAdenocarcinomaAdenocarcinoma of LungAdultAgedAsian PeopleCarcinoma, Squamous CellChromosomes, Human, Pair 10Chromosomes, Human, Pair 15Chromosomes, Human, Pair 17Chromosomes, Human, Pair 5Chromosomes, Human, Pair 6FemaleHumans

Identifiers

PMID23143601
PMCPMC4169232
OpenAlexW2049330354

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.