Evidence map›Paper›PMID 23143595›Full record

ArticleNature genetics2012

Recurrent mutation of the ID3 gene in Burkitt lymphoma identified by integrated genome, exome and transcriptome sequencing.

Julia Richter, Matthias Schlesner, Steve Hoffmann, Markus Kreuz, Ellen Leich, Birgit Burkhardt, Maciej Rosolowski, Ole Ammerpohl, Rabea Wagener, Stephan H Bernhart and 46 more

Open access · bronzeAbstract read
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In one paragraph

Article in Nature genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 231 papers.

0numbers the graph read from it
0cells of the map it votes in
231citing papers in PubMed
24.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

231 citing papers in PubMed, 436 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. TCF3 and ID3 Regulate TSPAN32 Expression in Burkitt Lymphoma.Scandinavian journal of immunology · 2025
    Article
  8. Audit of B-cell cancer genes.Blood advances · 2025
    Review
  9. Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. B-cell non-Hodgkin lymphomas.Lancet (London, England) · 2024
    Review

171 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

56 authors at 1 institution in 1 country.

Julia RichterInstitute of Human Genetics, Christian-Albrechts-University, Kiel, Germany.
Matthias Schlesner
Steve Hoffmann
Markus Kreuz
Ellen Leich
Birgit Burkhardt
Maciej Rosolowski
Ole Ammerpohl
Rabea Wagener
Stephan H Bernhart
Dido Lenze
Monika Szczepanowski
Maren Paulsen
Simone Lipinski
Robert B Russell
Sabine Adam-Klages
Gordana Apic
Alexander Claviez
Dirk Hasenclever
Volker Hovestadt
Nadine Hornig
Jan O Korbel
Dieter Kube
David Langenberger
Chris Lawerenz
Jasmin Lisfeld
Katharina Meyer
Simone Picelli
Jordan Pischimarov
Bernhard Radlwimmer
Tobias Rausch
Marius Rohde
Markus Schilhabel
René Scholtysik
Rainer Spang
Heiko Trautmann
Thorsten Zenz
Arndt Borkhardt
Hans G Drexler
Peter Möller
Roderick A F MacLeod
Christiane Pott
Stefan Schreiber
Lorenz Trümper
Markus Loeffler
Peter F Stadler
Peter Lichter
Roland Eils
Ralf Küppers
Michael Hummel
Wolfram Klapper
Philip Rosenstiel
Andreas Rosenwald
Benedikt Brors
Reiner Siebert
ICGC MMML-Seq Project
Christian-Albrechts-Universität zu Kiel · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Burkitt lymphoma is a mature aggressive B-cell lymphoma derived from germinal center B cells. Its cytogenetic hallmark is the Burkitt translocation t(8;14)(q24;q32) and its variants, which juxtapose the MYC oncogene with one of the three immunoglobulin loci. Consequently, MYC is deregulated, resulting in massive perturbation of gene expression. Nevertheless, MYC deregulation alone seems not to be sufficient to drive Burkitt lymphomagenesis. By whole-genome, whole-exome and transcriptome sequencing of four prototypical Burkitt lymphomas with immunoglobulin gene (IG)-MYC translocation, we identified seven recurrently mutated genes. One of these genes, ID3, mapped to a region of focal homozygous loss in Burkitt lymphoma. In an extended cohort, 36 of 53 molecularly defined Burkitt lymphomas (68%) carried potentially damaging mutations of ID3. These were strongly enriched at somatic hypermutation motifs. Only 6 of 47 other B-cell lymphomas with the IG-MYC translocation (13%) carried ID3 mutations. These findings suggest that cooperation between ID3 inactivation and IG-MYC translocation is a hallmark of Burkitt lymphomagenesis.

Indexed as

MutationBase SequenceBurkitt LymphomaChromosome MappingChromosomes, Human, Pair 14Chromosomes, Human, Pair 8Cohort StudiesFemaleGenes, ImmunoglobulinGenes, mycGenome, HumanHumansInhibitor of Differentiation ProteinsMaleMolecular Sequence DataNeoplasm ProteinsID3 protein, humanInhibitor of Differentiation ProteinsNeoplasm Proteins

Identifiers

PMID23143595
OpenAlexW2166170465

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.