Evidence map›Paper›PMID 23142384›Full record

ArticleGene2013

Expression and promoter analysis of a highly restricted integrin alpha gene in vascular smooth muscle.

Chad M Kitchen, Sarah L Cowan, Xiaochun Long, Joseph M Miano

Abstract read
In one paragraph

Article in Gene, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Integrin α8-Mediated Pericyte Morphogenesis Controls Blood-Brain Barrier Integrity.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Phenotypic Switching of Vascular Smooth Muscle Cells in Atherosclerosis.Journal of the American Heart Association · 2023
    Review
  7. Article
  8. Generation and Comparative Analysis of anNature cardiovascular research · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Selective expression of TSPAN2 in vascular smooth muscle is independently regulated by TGF-β1/SMAD and myocardin/serum response factor.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2017
    Article
  15. Article
  16. Article
  17. Article
  18. Ca2+/calmodulin-dependent protein kinase II-γ (CaMKIIγ) negatively regulates vascular smooth muscle cell proliferation and vascular remodeling.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2016
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Chad M KitchenAab Cardiovascular Research Institute, University of Rochester School of Medicine and Dentistry, 601 Elmwood Avenue, Rochester, NY 14642, USA.
Sarah L Cowan
Xiaochun Long
Joseph M Miano
University of Rochester · US

Funding

MOLECULAR CONTROL--SMOOTH MUSCLE CALPONIN EXPRESSIONR01HL062572 · NHLBI · UNIVERSITY OF ROCHESTER · PI MIANO, JOSEPH M · 1999 to 2011
$2.9M
Regulation of Vascular Smooth Muscle Cell Phenotype by a Novel Isoform of Glucose-6-Phosphate DehydrogenaseR01HL132574 · NHLBI · NEW YORK MEDICAL COLLEGE · PI GUPTE, SACHIN A, MIANO, JOSEPH M · 2017 to 2020
$2.5M
Bifunctionality of Myocardin in MyogenesisR01HL091168 · NHLBI · UNIVERSITY OF ROCHESTER · PI MIANO, JOSEPH M · 2008 to 2011
$1.5M
NHLBI NIH HHS HL-091168NHLBI NIH HHS HL-62572NHLBI NIH HHS R01 HL062572NHLBI NIH HHS R01 HL091168NHLBI NIH HHS R01 HL132574
6 · The paper itself

Abstract

Full genome annotation requires gene expression analysis and elucidation of promoter activity. Here, we analyzed the expression and promoter of a highly restricted integrin gene, Itga8. RNase protection and quantitative RT-PCR showed Itga8 to be expressed most abundantly in vascular smooth muscle cells (SMC). Transcription start site mapping of Itga8 revealed the immediate 5' promoter region to be poorly conserved with orthologous sequences in the human genome. Further comparative sequence analysis showed a number of conserved non-coding sequence modules around the Itga8 gene. The immediate promoter region and an upstream conserved sequence module were each found to contain a CArG box, which is a binding site for serum response factor (SRF). Luciferase reporter assays revealed activity of several Itga8 promoter constructs with no apparent restricted activity to SMC types. Further, neither SRF nor its coactivator, Myocardin (MYOCD), was able to induce several distinct Itga8 promoter constructs. Transgenic mouse studies failed to reveal Itga8 promoter activity, indicating distal regulatory elements likely control this gene's in vivo expression profile. Interestingly, although the promoter was unresponsive to SRF/MYOCD, the endogenous Itga8 gene showed increases in expression upon ectopic MYOCD expression even though knockdown of SRF both in vitro and in vivo failed to demonstrate a corresponding change in Itga8. Collectively, these data demonstrate that Itga8 expression is CArG-SRF independent, but MYOCD dependent through an as yet unknown sequence module that is distal from the promoter region.

Indexed as

Gene Expression RegulationPromoter Regions, GeneticAnimalsBase SequenceBinding SitesCell LineConserved SequenceHumansIntegrin alpha ChainsMiceMolecular Sequence DataMuscle, Smooth, VascularMyocardinMyocytes, Smooth MuscleNuclear ProteinsProtein Bindingintegrin alpha8Integrin alpha ChainsMyocardinNuclear ProteinsSerum Response FactorTrans-Activators

Identifiers

PMID23142384
PMCPMC3517168
OpenAlexW2095007435

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.