Evidence map›Paper›PMID 23141108›Full record

ArticleCurrent biology : CB2012

miR-786 regulation of a fatty-acid elongase contributes to rhythmic calcium-wave initiation in C. elegans.

Benedict J Kemp, Erik Allman, Lois Immerman, Megan Mohnen, Maureen A Peters, Keith Nehrke, Allison L Abbott

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. The multifaceted roles of microRNAs in differentiation.Current opinion in cell biology · 2020
    Review
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  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Benedict J KempDepartment of Biological Sciences, Marquette University, Milwaukee, WI 53201, USA.
Erik Allman
Lois Immerman
Megan Mohnen
Maureen A Peters
Keith Nehrke
Allison L Abbott
Marquette University · USOberlin College · USUniversity of Rochester · US

Funding

Training in Cellular, Biochemical and Molecular SciencesT32GM068411 · NIGMS · UNIVERSITY OF ROCHESTER · PI MAQUAT, LYNNE E · 2005 to 2019
$3.9M
Genetic Analysis of Conserved microRNAs in C. elegansR15GM084451 · NIGMS · MARQUETTE UNIVERSITY · PI ABBOTT, ALLISON LYNN · 2008 to 2014
$868k
NIGMS NIH HHS R15 GM084451NIGMS NIH HHS R15-GM084451NIGMS NIH HHS T32 GM068411
6 · The paper itself

Abstract

backgroundRhythmic behaviors are ubiquitous phenomena in animals. In C. elegans, defecation is an ultradian rhythmic behavior: every ∼50 s a calcium wave initiating in the posterior intestinal cells triggers the defecation motor program that comprises three sequential muscle contractions. Oscillatory calcium signaling is central to the periodicity of defecation. The posteriormost intestinal cells function as the pacemaker for this rhythmic behavior, although it is unclear how the supremacy of these cells for calcium-wave initiation is controlled.

resultsWe describe how the loss of the mir-240/786 microRNA cluster, which results in arrhythmic defecation, causes ectopic intestinal calcium-wave initiation. mir-240/786 expression in the intestine is restricted to the posterior cells that function as the defecation pacemaker. Genetic data indicate that mir-240/786 functions upstream of the inositol 1,4,5-trisphosphate (IP(3)) receptor. Through rescue analysis, it was determined that miR-786 functions to regulate defecation. Furthermore, we identified elo-2, a fatty-acid elongase with a known role in defecation cycling, as a direct target for miR-786. We propose that the regulation of palmitate levels through repression of elo-2 activity is the likely mechanistic link to defecation.

conclusionsTogether, these data indicate that miR-786 confers pacemaker status on posterior intestinal cells for the control of calcium-wave initiation through the regulation of elo-2 and, subsequently, palmitate levels. We propose that a difference in fatty-acid composition in the posterior intestinal cells may alter the activities of membrane proteins, such as IP(3)-receptor or TRPM channels, that control pacemaker activity in the C. elegans intestine.

Indexed as

Biological ClocksCalcium SignalingDefecationAcetyltransferasesAnimalsCaenorhabditis elegansCalciumFatty Acid ElongasesInositol 1,4,5-Trisphosphate ReceptorsIntestinal MucosaMicroRNAsPalmitic AcidsAcetyltransferasesCalciumFatty Acid ElongasesInositol 1,4,5-Trisphosphate ReceptorsMicroRNAsMIRN786 microRNA, C elegansPalmitic Acids

Identifiers

PMID23141108
PMCPMC3586602
OpenAlexW1972934989

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.