Evidence map›Paper›PMID 23136997›Full record

ArticleInternational journal of experimental pathology2012

Analysis of miR-376 RNA cluster members in the mouse inner ear.

Denise Yan, Yazhi Xing, Xiaomei Ouyang, Juhong Zhu, Zheng-Yi Chen, Hainan Lang, Xue Z Liu

Open access · greenAbstract read
In one paragraph

Article in International journal of experimental pathology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. MicroRNAs and Presbycusis.Aging and disease · 2018
    Review
  7. Article
  8. MicroRNAs: effective elements in ear-related diseases and hearing loss.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2017
    Review
  9. Review
  10. Review
  11. Article
  12. Review
  13. MicroRNAs in sensorineural diseases of the ear.Frontiers in molecular neuroscience · 2013
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Denise YanDepartment of Otolaryngology, University of Miami, Miami, FL 33136, USA.
Yazhi Xing
Xiaomei Ouyang
Juhong Zhu
Zheng-Yi Chen
Hainan Lang
Xue Z Liu
Medical University of South Carolina · USUniversity of Miami · USMassachusetts Eye and Ear Infirmary · US

Funding

SPEECH UNDERSTANDING IN REALISTIC ENVIRONMENTSP50DC000422 · NIDCD · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI DUBNO, JUDY R · 1989 to 2025
$45.3M
Molecular Genetics on Non Syndromic Hearing Loss (NSHL)R01DC005575 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LIU, XUE Z · 2001 to 2024
$10.6M
SOUTH CAROLINA CLINICAL & TRANSLATIONAL RESEARCH INSTITUTE (SCTR)UL1RR029882 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI BRADY, KATHLEEN T. · 2009 to 2011
$10.1M
South Carolina Clinical & Translational Research Institute (SCTR)UL1TR000062 · NCATS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI BRADY, KATHLEEN T. · 2012 to 2014
$9.4M
Sensory disorders in COVID -19 as an early identifier and healthcare worker protectionR01DC012115 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LIU, XUE Z · 2013 to 2022
$7.2M
Hair Cell DevelopmentR01DC006908 · NIDCD · MASSACHUSETTS GENERAL HOSPITAL · PI CHEN, ZHENG-YI · 2005 to 2015
$2.7M
Auditory Nerve Degeneration and RepairR01DC012058 · NIDCD · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI LANG, HAINAN · 2012 to 2016
$1.9M
Molecular Genetics of autosomal dominant non-syndromic hearing lossR01DC012546 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LIU, XUE Z · 2012 to 2016
$1.6M
Cell survival and cell death in the auditory nerveR03DC007506 · NIDCD · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI LANG, HAINAN · 2006 to 2008
$215k
PATHOPHYSIOLOGY OF PRESBYACUSISP01DC000422 · NIDCD · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI MILLS, JOHN H · 1991 to 1996
–
NCATS NIH HHS UL1 TR000062NCRR NIH HHS UL1 RR029882NCRR NIH HHS UL1RR029882NIDCD NIH HHS DC00422NIDCD NIH HHS DC012546NIDCD NIH HHS DC05575NIDCD NIH HHS DC07506NIDCD NIH HHS P50 DC000422NIDCD NIH HHS R01 DC005575NIDCD NIH HHS R01 DC006908NIDCD NIH HHS R01 DC012058NIDCD NIH HHS R01 DC012115NIDCD NIH HHS R01 DC012546NIDCD NIH HHS R03 DC007506
6 · The paper itself

Abstract

Mutations in phosphoribosyl pyrophosphate synthetase 1 (PRPS1) are associated with a spectrum of non-syndromic to syndromic hearing loss. PRPS1 transcript levels have been shown to be regulated by the microRNA-376 genes. The long primary RNA transcript of the miR-376 RNA cluster members undergo extensive and simultaneous A → I editing at one or both of two specific sites (+4 and +44) in particular human and mouse tissues. The PRPS1 gene, which contains target sites for the edited version of miR-376a-5p within its 3'UTR, has been shown to be repressed in a tissue-specific manner. To investigate whether the transcription of Prps1 is regulated by miR-376 cluster members in the mouse inner ear, we first quantified the expression of the mature miR-376 RNAs by quantitative real-time-PCR. The spatio-temporal patterns of miR-376 expression were assessed by in situ hybridization. Finally, we examined whether A →I editing of pri-miR-376 RNAs occurs in mouse inner ear by direct sequencing. Our data showed that the miR-376a-3p, b-3p, c-3p are present in mouse embryonic inner ears and intensive expression of miR-376a-3p/b-3p was detected in the sensory epithelia and ganglia of both auditory and vestibular portions of the inner ear. In adult inner ear, the expression of miR-376a-3p/b-3p is restricted within ganglion neurons of auditory and vestibular systems as well as the cells in the stria vascularis. Only unedited pri-miR-376 RNAs were detected in the cochlea suggesting that the activity of PRPS1 in the inner ear may not be regulated through the editing of miR-376 cluster.

Indexed as

AnimalsCochleaEar, InnerFemaleGene Expression RegulationHair Cells, Auditory, InnerIn Situ HybridizationMaleMiceMice, Inbred C57BLMicroRNAsNeuronsReal-Time Polymerase Chain ReactionRibose-Phosphate PyrophosphokinaseVestibule, LabyrinthMicroRNAsRibose-Phosphate Pyrophosphokinase

Identifiers

PMID23136997
PMCPMC3521901
OpenAlexW1592222912

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.