Evidence map›Paper›PMID 23136852›Full record

ArticleMolecular microbiology2013

A LuxR-type repressor of Burkholderia cenocepacia inhibits transcription via antiactivation and is inactivated by its cognate acylhomoserine lactone.

Gina T Ryan, Yuping Wei, Stephen C Winans

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Quorum sensing in theApplied and environmental microbiology · 2026
    Review
  4. Review
  5. TheApplied and environmental microbiology · 2022
    Review
  6. Article
  7. Article
  8. Quorum Sensing as Antivirulence Target in Cystic Fibrosis Pathogens.International journal of molecular sciences · 2019
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Gina T RyanDepartment of Microbiology, Cornell University, Ithaca, NY 14853, USA.
Yuping Wei
Stephen C Winans
Cornell University · US

Funding

INTERACTIONS BETWEEN AGROBACTERIUM AND HOST PLANTSR01GM042893 · NIGMS · CORNELL UNIVERSITY ITHACA · PI WINANS, STEPHEN C. · 1994 to 2010
$4.1M
NIGMS NIH HHS R01 GM042893NIGMS NIH HHS R01-GM042893
6 · The paper itself

Abstract

Burkholderia cenocepacia is an opportunistic human pathogen that encodes two LuxI-type acylhomoserine lactone (AHL) synthases and three LuxR-type AHL receptors. Of these, cepI and cepR form a cognate synthase/receptor pair, as do cciI and cciR, while cepR2 lacks a genetically linked AHL synthase gene. Another group showed that a cepR2 mutant overexpressed a cluster of linked genes that appear to direct the production of a secondary metabolite. We found that these same genes were upregulated by octanoylhomoserine lactone (OHL), which is synthesized by CepI. These data suggest that several cepR2-linked promoters are repressed by CepR2 and that CepR2 is antagonized by OHL. Fusions of two divergent promoters to lacZ were used to confirm these hypotheses, and promoter resections and DNase I footprinting assays revealed a single CepR2 binding site between the two promoters. This binding site lies well upstream of both promoters, suggesting an unusual mode of repression. Adjacent to the cepR2 gene is a gene that we designate cepS, which encodes an AraC-type transcription factor. CepS is essential for expression of both promoters, regardless of the CepR2 status or OHL concentration. CepS therefore acts downstream of CepR2, and CepR2 appears to function as a CepS antiactivator.

Indexed as

Transcription, GeneticAcyl-ButyrolactonesAraC Transcription FactorBacterial ProteinsBase SequenceBinding SitesBurkholderia cenocepaciaDNA FootprintingElectrophoretic Mobility Shift AssayGene Expression RegulationGene Expression Regulation, BacterialHumansPromoter Regions, GeneticProtein BindingQuorum SensingRepressor ProteinsAcyl-ButyrolactonesAraC Transcription FactorBacterial ProteinsCepR protein, BurkholderiaRepressor Proteins

Identifiers

PMID23136852
PMCPMC3535678
OpenAlexW2136568287

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.