Evidence map›Paper›PMID 23136525›Full record

ArticleBreeding science2012

DNA marker-assisted evaluation of potato genotypes for potential resistance to potato cyst nematode pathotypes not yet invading into Japan.

Kenji Asano, Akira Kobayashi, Shogo Tsuda, Mio Nishinaka, Seiji Tamiya

Open access · bronzeAbstract read
In one paragraph

Article in Breeding science, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification by GWAS of marker haplotypes relevant to breed potato for Globodera pallida resistance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  4. Article
  5. Article
  6. Studies of potato resistance toBreeding science · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Resisting Potato Cyst Nematodes With Resistance.Frontiers in plant science · 2021
    Review
  12. Mapping and QTL Analysis of Early-Maturity Traits in Tetraploid Potato (International journal of molecular sciences · 2018
    Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kenji AsanoUpland Farming Research Division, NARO Hokkaido Agricultural Research Center , 9-4, Shinsei-minami, Memuro, Kasai, Hokkaido 082-0081, Japan.
Akira Kobayashi
Shogo Tsuda
Mio Nishinaka
Seiji Tamiya
Hokkaido Agricultural Research Center · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One of major objectives of crop breeding is conferring resistance to diseases and pests. However, large-scale phenotypic evaluation for many diseases and pests is difficult because strict controls are required to prevent their spread. Detection of disease resistance genes by using DNA markers may be an alternative approach to select potentially resistant accessions. Potato (Solanum tuberosum L.) breeders in Japan extensively use resistance gene H1, which confers nearly absolute resistance to potato cyst nematode (Globodera rostochiensis) pathotype Ro1, the only pathotype found in Japan. However, considering the possibility of accidental introduction of the other pathotypes, breeding of resistant varieties is an important strategy to prevent infestation by non-invading pathotypes in Japan. In this study, to evaluate the prevalence of resistance genes in Japanese genetic resources, we developed a multiplex PCR method that simultaneously detects 3 resistance genes, H1, Gpa2 and Gro1-4. We revealed that many Japanese varieties possess not only H1 but Gpa2, which are potentially resistant to other pathotypes of potato cyst nematode. On the other hand, no genotype was found to have the Gro1-4, indicating importance of introduction of varieties having Gro1-4. Our results demonstrate the applicability of DNA-marker assisted evaluation of resistant potato genotypes without phenotypic evaluation.

Indexed as

crop breedingDNA markermultiplex PCRpathotypepotato cyst nematoderesistance gene

Identifiers

PMID23136525
PMCPMC3405971
OpenAlexW1985390864

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.