Evidence map›Paper›PMID 23136382›Full record

ArticlePlant physiology2013

Rhizobial and mycorrhizal symbioses in Lotus japonicus require lectin nucleotide phosphohydrolase, which acts upstream of calcium signaling.

Nicholas J Roberts, Giulia Morieri, Gurpreet Kalsi, Alan Rose, Jiri Stiller, Anne Edwards, Fang Xie, Peter M Gresshoff, Giles E D Oldroyd, J Allan Downie and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
8.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. AProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  6. Article
  7. Article
  8. Biological roles of glycans.Glycobiology · 2017
    Review
  9. Review
  10. A role for the mevalonate pathway in early plant symbiotic signaling.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Nicholas J RobertsDepartment of Molecular and Cellular Biology, University of California, Davis, California 95616, USA.
Giulia Morieri
Gurpreet Kalsi
Alan Rose
Jiri Stiller
Anne Edwards
Fang Xie
Peter M Gresshoff
Giles E D Oldroyd
J Allan Downie
Marilynn E Etzler
John Innes Centre · GBUniversity of California, Davis · USAustralian Research Council · AU

Funding

STRUCTURE/FUNCTION RELATIONSHIPS OF LECTINSR01GM021882 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI ETZLER, MARILYNN E · 1985 to 2003
$1.2M
Biotechnology and Biological Sciences Research Council BBS/E/J/00000603NIGMS NIH HHS GM21882
6 · The paper itself

Abstract

Nodulation in legumes requires the recognition of rhizobially made Nod factors. Genetic studies have revealed that the perception of Nod factors involves LysM domain receptor-like kinases, while biochemical approaches have identified LECTIN NUCLEOTIDE PHOSPHOHYDROLASE (LNP) as a Nod factor-binding protein. Here, we show that antisense inhibition of LNP blocks nodulation in Lotus japonicus. This absence of nodulation was due to a defect in Nod factor signaling based on the observations that the early nodulation gene NODULE INCEPTION was not induced and that both Nod factor-induced perinuclear calcium spiking and calcium influx at the root hair tip were blocked. However, Nod factor did induce root hair deformation in the LNP antisense lines. LNP is also required for infection by the mycorrhizal fungus Glomus intraradices, suggesting that LNP plays a role in the common signaling pathway shared by the rhizobial and mycorrhizal symbioses. Taken together, these observations indicate that LNP acts at a novel position in the early stages of symbiosis signaling. We propose that LNP functions at the earliest stage of the common nodulation and mycorrhization symbiosis signaling pathway downstream of the Nod factor receptors; it may act either by influencing signaling via changes in external nucleotides or in conjunction with the LysM receptor-like kinases for recognition of Nod factor.

Indexed as

Calcium SignalingSymbiosisApyraseCalciumGene Knockdown TechniquesLipopolysaccharidesLotusMesorhizobiumMycorrhizaeNitrogen FixationPhenotypePlant ProteinsPlant Root NodulationPlants, Genetically ModifiedRoot Nodules, PlantApyraseCalciumLipopolysaccharidesNIN protein, Lotus japonicusPlant Proteins

Identifiers

PMID23136382
PMCPMC3532285
OpenAlexW2116447883

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.