Evidence map›Paper›PMID 23133669›Full record

ArticlePloS one2012

Ion conduction through the hERG potassium channel.

Luisa Ceccarini, Matteo Masetti, Andrea Cavalli, Maurizio Recanatini

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Exploring Conformational Dynamics of the ExtracellularJournal of chemical information and modeling · 2020
    Article
  3. Selectivity filter modalities and rapid inactivation of the hERG1 channel.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  4. Conduction through a narrow inward-rectifier KThe Journal of general physiology · 2019
    Article
  5. Article
  6. Article
  7. Dynamics of the EAG1 KBiochemical and biophysical research communications · 2017
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Luisa CeccariniDepartment of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy.
Matteo Masetti
Andrea Cavalli
Maurizio Recanatini
University of Bologna · ITItalian Institute of Technology · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The inward rectifier voltage-gated potassium channel hERG is of primary importance for the regulation of the membrane potential of cardiomyocytes. Unlike most voltage-gated K(+)-channels, hERG shows a low elementary conductance at physiological voltage and potassium concentration. To investigate the molecular features underlying this unusual behavior, we simulated the ion conduction through the selectivity filter at a fully atomistic level by means of molecular dynamics-based methods, using a homology-derived model. According to our calculations, permeation of potassium ions can occur along two pathways, one involving site vacancies inside the filter (showing an energy barrier of about 6 kcal mol(-1)), and the other characterized by the presence of a knock-on intermediate (about 8 kcal mol(-1)). These barriers are indeed in accordance with a low conductance behavior, and can be explained in terms of a series of distinctive structural features displayed by the hERG ion permeation pathway.

Indexed as

IonsComputer SimulationCrystallography, X-RayElectric ConductivityElectrophysiologyERG1 Potassium ChannelEther-A-Go-Go Potassium ChannelsHumansIon Channel GatingLipid BilayersMembrane PotentialsModels, BiologicalModels, MolecularMolecular ConformationMotionPotassiumERG1 Potassium ChannelEther-A-Go-Go Potassium ChannelsIonsKCNH2 protein, humanLipid BilayersPotassium

Identifiers

PMID23133669
PMCPMC3487835
OpenAlexW2089769179

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.