Evidence map›Paper›PMID 23133404›Full record

ArticlePLoS genetics2012

A bacteriophage-encoded J-domain protein interacts with the DnaK/Hsp70 chaperone and stabilizes the heat-shock factor σ32 of Escherichia coli.

Elsa Perrody, Anne-Marie Cirinesi, Carine Desplats, France Keppel, Françoise Schwager, Samuel Tranier, Costa Georgopoulos, Pierre Genevaux

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
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  7. Phage-encoded ten-eleven translocation dioxygenase (TET) is active in C5-cytosine hypermodification in DNA.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Elsa PerrodyLaboratoire de Microbiologie et Génétique Moléculaire (LMGM), UMR5100, Centre National de la Recherche Scientifique (CNRS) and Université Paul Sabatier, Toulouse, France.
Anne-Marie Cirinesi
Carine Desplats
France Keppel
Françoise Schwager
Samuel Tranier
Costa Georgopoulos
Pierre Genevaux
University of Geneva · CHCentre National de la Recherche Scientifique · FRUniversité Toulouse III - Paul Sabatier · FRUniversity of Utah · US

Funding

Protein folding by the universally conserved GroEL (Hsp60) chaperone machine andR01GM088207 · NIGMS · UNIVERSITY OF UTAH · PI GEORGOPOULOS, COSTA · 2010 to 2013
$1.1M
NIGMS NIH HHS GM88207NIGMS NIH HHS R01 GM088207
6 · The paper itself

Abstract

The universally conserved J-domain proteins (JDPs) are obligate cochaperone partners of the Hsp70 (DnaK) chaperone. They stimulate Hsp70's ATPase activity, facilitate substrate delivery, and confer specific cellular localization to Hsp70. In this work, we have identified and characterized the first functional JDP protein encoded by a bacteriophage. Specifically, we show that the ORFan gene 057w of the T4-related enterobacteriophage RB43 encodes a bona fide JDP protein, named Rki, which specifically interacts with the Escherichia coli host multifunctional DnaK chaperone. However, in sharp contrast with the three known host JDP cochaperones of DnaK encoded by E. coli, Rki does not act as a generic cochaperone in vivo or in vitro. Expression of Rki alone is highly toxic for wild-type E. coli, but toxicity is abolished in the absence of endogenous DnaK or when the conserved J-domain of Rki is mutated. Further in vivo analyses revealed that Rki is expressed early after infection by RB43 and that deletion of the rki gene significantly impairs RB43 proliferation. Furthermore, we show that mutations in the host dnaK gene efficiently suppress the growth phenotype of the RB43 rki deletion mutant, thus indicating that Rki specifically interferes with DnaK cellular function. Finally, we show that the interaction of Rki with the host DnaK chaperone rapidly results in the stabilization of the heat-shock factor σ(32), which is normally targeted for degradation by DnaK. The mechanism by which the Rki-dependent stabilization of σ(32) facilitates RB43 bacteriophage proliferation is discussed.

Indexed as

BacteriophagesEscherichia coli ProteinsHSP70 Heat-Shock ProteinsSigma FactorCell ProliferationEscherichia coliGene Expression Regulation, BacterialGenetic Complementation TestMolecular ChaperonesMutationProtein Structure, TertiaryViral ProteinsdnaK protein, E coliEscherichia coli ProteinsHSP70 Heat-Shock ProteinsMolecular ChaperonesSigma FactorViral Proteins

Identifiers

PMID23133404
PMCPMC3486835
OpenAlexW2045229525

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.