Evidence map›Paper›PMID 23133392›Full record

ArticlePLoS genetics2012

Topoisomerase II- and condensin-dependent breakage of MEC1ATR-sensitive fragile sites occurs independently of spindle tension, anaphase, or cytokinesis.

Nadia Hashash, Anthony L Johnson, Rita S Cha

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Not all roads lead to Cdk1.Cell cycle (Georgetown, Tex.) · 2017
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Chromosome Dynamics during Mitosis.Cold Spring Harbor perspectives in biology · 2015
    Review
  14. Article
  15. Review
  16. Article
  17. Mechanisms of chromosomal instability in melanoma.Environmental and molecular mutagenesis · 2014
    Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Nadia HashashDivision of Stem Cell Biology and Developmental Genetics, National Institute for Medical Research, Medical Research Council, London, United Kingdom.
Anthony L Johnson
Rita S Cha
Medical Research Council · GBNational Cancer Institute · US

Funding

Medical Research Council U.1175.01.005.00005.01
6 · The paper itself

Abstract

Fragile sites are loci of recurrent chromosome breakage in the genome. They are found in organisms ranging from bacteria to humans and are implicated in genome instability, evolution, and cancer. In budding yeast, inactivation of Mec1, a homolog of mammalian ATR, leads to chromosome breakage at fragile sites referred to as replication slow zones (RSZs). RSZs are proposed to be homologous to mammalian common fragile sites (CFSs) whose stability is regulated by ATR. Perturbation during S phase, leading to elevated levels of stalled replication forks, is necessary but not sufficient for chromosome breakage at RSZs or CFSs. To address the nature of additional event(s) required for the break formation, we examined involvement of the currently known or implicated mechanisms of endogenous chromosome breakage, including errors in replication fork restart, premature mitotic chromosome condensation, spindle tension, anaphase, and cytokinesis. Results revealed that chromosome breakage at RSZs is independent of the RAD52 epistasis group genes and of TOP3, SGS1, SRS2, MMS4, or MUS81, indicating that homologous recombination and other recombination-related processes associated with replication fork restart are unlikely to be involved. We also found spindle force, anaphase, or cytokinesis to be dispensable. RSZ breakage, however, required genes encoding condensin subunits (YCG1, YSC4) and topoisomerase II (TOP2). We propose that chromosome break formation at RSZs following Mec1 inactivation, a model for mammalian fragile site breakage, is mediated by internal chromosomal stress generated during mitotic chromosome condensation.

Indexed as

Chromosome BreakageChromosome Fragile SitesSpindle ApparatusAdenosine TriphosphatasesAnaphaseCytokinesisDNA-Binding ProteinsDNA ReplicationDNA Topoisomerases, Type IIIntracellular Signaling Peptides and ProteinsMitosisMultiprotein ComplexesProtein BindingProtein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsSaccharomycetalesAdenosine Triphosphatasescondensin complexesDNA-Binding ProteinsDNA Topoisomerases, Type IIIntracellular Signaling Peptides and ProteinsMEC1 protein, S cerevisiaeMultiprotein ComplexesProtein Serine-Threonine KinasesSaccharomyces cerevisiae Proteins

Identifiers

PMID23133392
PMCPMC3486896
OpenAlexW2077769730

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.