Evidence map›Paper›PMID 23133389›Full record

ArticlePLoS pathogens2012

Circulating virus load determines the size of bottlenecks in viral populations progressing within a host.

Serafín Gutiérrez, Michel Yvon, Elodie Pirolles, Eliza Garzo, Alberto Fereres, Yannis Michalakis, Stéphane Blanc

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
7.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 46 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Serafín GutiérrezUnité Mixte de Recherche BGPI, INRA-CIRAD-SupAgro, TA A-54/K, Campus International de Baillarguet, Montpellier, France.
Michel Yvon
Elodie Pirolles
Eliza Garzo
Alberto Fereres
Yannis Michalakis
Stéphane Blanc
Consejo Superior de Investigaciones Científicas · ESInstitut Agro Montpellier · FRBiologie et Génétique des Interactions Plante-Parasite · FRCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRMaladies Infectieuses et Vecteurs: Écologie, Génétique, Évolution et Contrôle · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

For any organism, population size, and fluctuations thereof, are of primary importance in determining the forces driving its evolution. This is particularly true for viruses--rapidly evolving entities that form populations with transient and explosive expansions alternating with phases of migration, resulting in strong population bottlenecks and associated founder effects that increase genetic drift. A typical illustration of this pattern is the progression of viral disease within a eukaryotic host, where such demographic fluctuations are a key factor in the emergence of new variants with altered virulence. Viruses initiate replication in one or only a few infection foci, then move through the vasculature to seed secondary infection sites and so invade distant organs and tissues. Founder effects during this within-host colonization might depend on the concentration of infectious units accumulating and circulating in the vasculature, as this represents the infection dose reaching new organs or "territories". Surprisingly, whether or not the easily measurable circulating (plasma) virus load directly drives the size of population bottlenecks during host colonization has not been documented in animal viruses, while in plants the virus load within the sap has never been estimated. Here, we address this important question by monitoring both the virus concentration flowing in host plant sap, and the number of viral genomes founding the population in each successive new leaf. Our results clearly indicate that the concentration of circulating viruses directly determines the size of bottlenecks, which hence controls founder effects and effective population size during disease progression within a host.

Indexed as

AnimalsAphidsBrassica rapaCaulimovirusGenome, ViralPlant DiseasesPlant LeavesViral Load

Identifiers

PMID23133389
PMCPMC3486874
OpenAlexW2056095410

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.