Evidence map›Paper›PMID 23129613›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Protein tyrosine phosphatase 1B is a key regulator of IFNAR1 endocytosis and a target for antiviral therapies.

Christopher J Carbone, Hui Zheng, Sabyasachi Bhattacharya, John R Lewis, Alexander M Reiter, Paula Henthorn, Zhong-Yin Zhang, Darren P Baker, Radha Ukkiramapandian, Kendra K Bence and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. LncRNAs in the Type I Interferon Antiviral Response.International journal of molecular sciences · 2020
    Review
  9. Review
  10. Article
  11. Article
  12. Differential Regulation of Type I and Type III Interferon Signaling.International journal of molecular sciences · 2019
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Christopher J CarboneMari Lowe Comparative Oncology Center and Department of Animal Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Hui Zheng
Sabyasachi Bhattacharya
John R Lewis
Alexander M Reiter
Paula Henthorn
Zhong-Yin Zhang
Darren P Baker
Radha Ukkiramapandian
Kendra K Bence
Serge Y Fuchs
University of Pennsylvania · USBiogen (United States) · USIndiana University – Purdue University Indianapolis · US

Funding

Role of HOS in Cell Transformation and ApoptosisR01CA092900 · NCI · UNIVERSITY OF PENNSYLVANIA · PI FUCHS, SERGE Y · 2001 to 2021
$5.3M
Interferon Responses in Myeloid LeukemiaR01CA142425 · NCI · UNIVERSITY OF PENNSYLVANIA · PI FUCHS, SERGE Y · 2010 to 2014
$1.6M
NCI NIH HHS CA092900NCI NIH HHS CA142425NCI NIH HHS R01 CA092900NCI NIH HHS R01 CA142425
6 · The paper itself

Abstract

Type 1 interferons (IFN1) elicit antiviral defenses by activating the cognate receptor composed of IFN-α/β receptor chain 1 (IFNAR1) and IFNAR2. Down-regulation of this receptor occurs through IFN1-stimulated IFNAR1 ubiquitination, which exposes a Y466-based linear endocytic motif within IFNAR1 to recruitment of the adaptin protein-2 complex (AP2) and ensuing receptor endocytosis. Paradoxically, IFN1-induced Janus kinase-mediated phosphorylation of Y466 is expected to decrease its affinity for AP2 and to inhibit the endocytic rate. To explain how IFN1 promotes Y466 phosphorylation yet stimulates IFNAR1 internalization, we proposed that the activity of a protein tyrosine phosphatase (PTP) is required to enable both events by dephosphorylating Y466. An RNAi-based screen identified PTP1B as a specific regulator of IFNAR1 endocytosis stimulated by IFN1, but not by ligand-independent inducers of IFNAR1 ubiquitination. PTP1B is a promising target for treatment of obesity and diabetes; numerous research programs are aimed at identification and characterization of clinically relevant inhibitors of PTP1B. PTP1B is capable of binding and dephosphorylating IFNAR1. Genetic or pharmacologic modulation of PTP1B activity regulated IFN1 signaling in a manner dependent on the integrity of Y466 within IFNAR1 in human cells. These effects were less evident in mouse cells whose IFNAR1 lacks an analogous motif. PTP1B inhibitors robustly augmented the antiviral effects of IFN1 against vesicular stomatitis and hepatitis C viruses in human cells and proved beneficial in feline stomatitis patients. The clinical significance of these findings in the context of using PTP1B inhibitors to increase the therapeutic efficacy of IFN against viral infections is discussed.

Indexed as

Amino Acid SequenceAnimalsAntiviral AgentsEndocytosisHEK293 CellsHumansLigandsMiceMolecular Sequence DataPhosphorylationPhosphotyrosineProtein StabilityProtein Tyrosine Phosphatase, Non-Receptor Type 1Receptor, Interferon alpha-betaSignal TransductionAntiviral AgentsIFNAR1 protein, humanIfnar1 protein, mouseLigandsPhosphotyrosineProtein Tyrosine Phosphatase, Non-Receptor Type 1Receptor, Interferon alpha-beta

Identifiers

PMID23129613
PMCPMC3511142
OpenAlexW2095776275

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.