Evidence map›Paper›PMID 23129215›Full record

ArticlePlanta2013

Effects of drought on the microtranscriptome of field-grown sugarcane plants.

Agustina Gentile, Thaís H Ferreira, Raphael S Mattos, Lara I Dias, Andrea A Hoshino, Monalisa S Carneiro, Glaucia M Souza, Tercílio Calsa, Rejane M Nogueira, Laurício Endres and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Planta, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
7.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 80 citations in OpenAlex.

  1. Enhanced expression of theGM crops & food · 2026
    Article
  2. Article
  3. Review
  4. Non-Coding RNAs in Response to Drought Stress.International journal of molecular sciences · 2021
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. MicroRNA dynamics in a wild and cultivated species of Convolvulaceae exposed to drought stress.Physiology and molecular biology of plants : an international journal of functional plant biology · 2017
    Article
  13. Review
  14. MicroRNAs and Their Regulatory Role in Sugarcane.Frontiers in plant science · 2017
    Review
  15. Article
  16. MicroRNAs and drought responses in sugarcane.Frontiers in plant science · 2015
    Review
  17. Article
  18. Review
  19. Article
  20. Drought stress responses in crops.Functional & integrative genomics · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 1 country.

Agustina GentileLaboratório de Genoma Funcional, Departamento de Genética, Evolução e Bioagentes, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, SP, Brazil.
Thaís H Ferreira
Raphael S Mattos
Lara I Dias
Andrea A Hoshino
Monalisa S Carneiro
Glaucia M Souza
Tercílio Calsa
Rejane M Nogueira
Laurício Endres
Marcelo Menossi
Universidade Estadual de Campinas (UNICAMP) · BRUniversidade de São Paulo · BRUniversidade Federal de Alagoas · BRUniversidade Federal de Pernambuco · BRUniversidade Federal de São Carlos · BRUniversidade Federal Rural de Pernambuco · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sugarcane (Saccharum spp.) is the most promising crop for renewable energy. Among the diverse stresses that affect plant productivity, drought stress frequently causes losses in sugarcane fields. Although several studies have addressed plant responses to drought using controlled environments, plant responses under field conditions are largely unknown. Recently, microRNA (miRNA)-mediated post-transcriptional regulation has been described as an important and decisive component in vegetal development and stress resistance modulation. The role of miRNAs in sugarcane responses to drought under field conditions is currently not known. Two sugarcane cultivars differing in drought tolerance were grown in the field with and without irrigation (rainfed) for 7 months. By using small RNA deep sequencing, we were able to identify 18 miRNA families comprising 30 mature miRNA sequences. Among these families, we found 13 mature miRNAs that were differentially expressed in drought-stressed plants. Seven miRNAs were differentially expressed in both cultivars. The target genes for many of the differentially expressed mature miRNAs were predicted, and some of them were validated by quantitative reverse transcription PCR. Among the targets, we found transcription factors, transporters, proteins associated with senescence, and proteins involved with flower development. All of these data increase our understanding of the role of miRNAs in the complex regulation of drought stress in field-grown sugarcane, providing valuable tools to develop new sugarcane cultivars tolerant to drought stress.

Indexed as

DroughtsBase PairingBase SequenceComputational BiologyDehydrationGene Expression ProfilingGene Expression Regulation, PlantHigh-Throughput Nucleotide SequencingMicroRNAsMolecular Sequence DataPlant LeavesReproducibility of ResultsReverse Transcriptase Polymerase Chain ReactionRNA, PlantSaccharumStress, PhysiologicalMicroRNAsRNA, Plant

Identifiers

PMID23129215
PMCPMC3579473
OpenAlexW1985027428

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.