Evidence map›Paper›PMID 23129207›Full record

ArticlePlant physiology2013

The mitochondrial folylpolyglutamate synthetase gene is required for nitrogen utilization during early seedling development in arabidopsis.

Ling Jiang, Yanyan Liu, Hong Sun, Yueting Han, Jinglai Li, Changkun Li, Wenzhu Guo, Hongyan Meng, Sha Li, Yunliu Fan and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
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  4. Foxtail millet [Frontiers in nutrition · 2023
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  11. Review
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  15. Review
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  17. Article
  18. The maize brown midrib4 (bm4) gene encodes a functional folylpolyglutamate synthase.The Plant journal : for cell and molecular biology · 2015
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Ling JiangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, People's Republic of China.
Yanyan Liu
Hong Sun
Yueting Han
Jinglai Li
Changkun Li
Wenzhu Guo
Hongyan Meng
Sha Li
Yunliu Fan
Chunyi Zhang
Biotechnology Research Institute · CNChinese Academy of Agricultural Sciences · CNHuazhong Agricultural University · CNLanzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Investigations into the biochemical processes and regulatory mechanisms of nitrogen (N) utilization can aid in understanding how N is used efficiently in plants. This report describes a deficiency in N utilization in an Arabidopsis (Arabidopsis thaliana) transfer DNA insertion mutant of the mitochondrial folylpolyglutamate synthetase gene DFC, which catalyzes the conjugation of glutamate residues to the tetrahydrofolate during folate synthesis. The mutant seedlings displayed several metabolic changes that are typical of plant responses to low-N stress, including increased levels of starch and anthocyanin synthesis as well as decreased levels of soluble protein and free amino acid, as compared with those in wild-type seedlings when external N was sufficient. More striking changes were observed when dfc seedlings were grown under N-limited conditions, including shorter primary roots, fewer lateral roots, higher levels of glycine and carbon-N ratios, and lower N content than those in wild-type seedlings. Gene expression studies in mutant seedlings revealed altered transcript levels of several genes involved in folate biosynthesis and N metabolism. The biochemical and metabolic changes also suggested that N assimilation is drastically perturbed due to a loss of DFC function. The observation that elevated CO(2) partly rescued the dfc phenotypes suggests that the alterations in N metabolism in dfc may be mainly due to a defect in photorespiration. These results indicate that DFC is required for N utilization in Arabidopsis and provide new insight into a potential interaction between folate and N metabolism.

Indexed as

Amino AcidsAnthocyaninsArabidopsisArabidopsis ProteinsCarbonFolic AcidGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGlycineImmunoblottingMitochondrial ProteinsMutationNitrogenPeptide SynthasesPlant RootsReverse Transcriptase Polymerase Chain ReactionAmino AcidsAnthocyaninsArabidopsis ProteinsCarbonFolic Acidfolylpolyglutamate synthetaseGlycineMitochondrial ProteinsNitrogenPeptide SynthasesStarch

Identifiers

PMID23129207
PMCPMC3561033
OpenAlexW2121342119

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.