Evidence map›Paper›PMID 23126649›Full record

ArticleBiochemistry2012

Redox thermodynamics of high-spin and low-spin forms of chlorite dismutases with diverse subunit and oligomeric structures.

Stefan Hofbauer, Marzia Bellei, Axel Sündermann, Katharina F Pirker, Andreas Hagmüller, Georg Mlynek, Julius Kostan, Holger Daims, Paul G Furtmüller, Kristina Djinović-Carugo and 3 more

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Independent evolution of four heme peroxidase superfamilies.Archives of biochemistry and biophysics · 2015
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Stefan HofbauerDepartment of Chemistry, Division of Biochemistry, VIBT-Vienna Institute of BioTechnology, BOKU-University of Natural Resources and Life Sciences, A-1190 Vienna, Austria.
Marzia Bellei
Axel Sündermann
Katharina F Pirker
Andreas Hagmüller
Georg Mlynek
Julius Kostan
Holger Daims
Paul G Furtmüller
Kristina Djinović-Carugo
Chris Oostenbrink
Gianantonio Battistuzzi
Christian Obinger
BOKU University · ATMax Perutz Labs · ATUniversity of Modena and Reggio Emilia · ITUniversity of Vienna · ATAustrian Institute of Technology · AT

Funding

Austrian Science Fund FWF P 25270Austrian Science Fund FWF W 1224
6 · The paper itself

Abstract

Chlorite dismutases (Clds) are heme b-containing oxidoreductases that convert chlorite to chloride and dioxygen. In this work, the thermodynamics of the one-electron reduction of the ferric high-spin forms and of the six-coordinate low-spin cyanide adducts of the enzymes from Nitrobacter winogradskyi (NwCld) and Candidatus "Nitrospira defluvii" (NdCld) were determined through spectroelectrochemical experiments. These proteins belong to two phylogenetically separated lineages that differ in subunit (21.5 and 26 kDa, respectively) and oligomeric (dimeric and pentameric, respectively) structure but exhibit similar chlorite degradation activity. The E°' values for free and cyanide-bound proteins were determined to be -119 and -397 mV for NwCld and -113 and -404 mV for NdCld, respectively (pH 7.0, 25 °C). Variable-temperature spectroelectrochemical experiments revealed that the oxidized state of both proteins is enthalpically stabilized. Molecular dynamics simulations suggest that changes in the protein structure are negligible, whereas solvent reorganization is mainly responsible for the increase in entropy during the redox reaction. Obtained data are discussed with respect to the known structures of the two Clds and the proposed reaction mechanism.

Indexed as

Catalytic DomainChloridesElectron Spin Resonance SpectroscopyEntropyFerric CompoundsFerrous CompoundsModels, MolecularMolecular Dynamics SimulationNitrobacterOxidation-ReductionOxidoreductasesProtein ConformationProtein Structure, QuaternaryThermodynamicsChlorideschloritechlorite dismutaseFerric CompoundsFerrous CompoundsOxidoreductases

Identifiers

PMID23126649
PMCPMC3557923
OpenAlexW2085017321

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.