Evidence map›Paper›PMID 23124225›Full record

ArticleApplied and environmental microbiology2013

Occurrence of virulence genes associated with Diarrheagenic pathotypes in Escherichia coli isolates from surface water.

Jatinder P S Sidhu, Warish Ahmed, Leonie Hodgers, Simon Toze

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. Identification and characterization ofJournal of water and health · 2026
    Article
  3. Article
  4. Occurrence of Shiga-toxigenic and enteropathogenicJournal of water and health · 2025
    Article
  5. Article
  6. Multidrug-Resistant VirulentInternational journal of microbiology · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. The Ability of Shiga Toxin-ProducingFoods (Basel, Switzerland) · 2022
    Article
  11. Article
  12. Prevalence and Diversity of Antibiotic ResistantFrontiers in public health · 2022
    Article
  13. Article
  14. Genomic Insights of Multidrug-ResistantFrontiers in veterinary science · 2021
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Distribution of Antibiotic-ResistantFrontiers in microbiology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jatinder P S SidhuCSIRO Land and Water, Ecosciences Precinct, Queensland, Australia.
Warish Ahmed
Leonie Hodgers
Simon Toze

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Escherichia coli isolates (n = 300) collected from six sites in subtropical Brisbane, Australia, prior to and after storm events were tested for the presence of 11 virulence genes (VGs) specific to diarrheagenic pathotypes. The presence of eaeA, stx(1), stx(2), and ehxA genes specific for the enterohemorrhagic E. coli (EHEC) pathotype was detected in 56%, 6%, 10%, and 13% of isolates, respectively. The VGs astA (69%) and aggR (29%), carried by enteroaggregative (EAEC) pathotypes, were frequently detected in E. coli isolates. The enteropathogenic E. coli (EPEC) gene bfp was detected in 24% of isolates. In addition, enteroinvasive E. coli (EIEC) VG ipaH was also detected in 14% of isolates. During dry periods, isolates belonging to the EAEC pathotype were most commonly detected (23%), followed by EHEC (11%) and EPEC (11%). Conversely, a more uniform prevalence of pathotypes, EPEC (14%), EAEC (12%), EIEC (10%), EHEC (7%), and ETEC (7%), was observed after the storm events. The results of this study highlight the widespread occurrence of potentially diarrheagenic pathotypes in the urban aquatic ecosystems. While the presence of VGs in E. coli isolates alone is insufficient to determine pathogenicity, the presence of diarrheagenic E. coli pathotypes in high frequency after the storm events could lead to increased health risks if untreated storm water were to be used for nonpotable purposes and recreational activities.

Indexed as

Water MicrobiologyAustraliaEscherichia coliEscherichia coli ProteinsGenotypePrevalenceUrban PopulationVirulence FactorsEscherichia coli ProteinsVirulence Factors

Identifiers

PMID23124225
PMCPMC3536071

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.