Evidence map›Paper›PMID 23124201›Full record

ArticleThe Journal of biological chemistry2012

Localization and substrate selectivity of sea urchin multidrug (MDR) efflux transporters.

Tufan Gökirmak, Joseph P Campanale, Lauren E Shipp, Gary W Moy, Houchao Tao, Amro Hamdoun

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
  2. An IMPDH2 variant associated with neurodevelopmental disorder disrupts purine biosynthesis and somite organization.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  6. The roles of ABCB1/P-glycoprotein drug transporters in regulating gut microbes and inflammation: insights from animal models, old and new.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  7. Semi-automated, high-content imaging of drug transporter knockout sea urchin (Lytechinus pictus) embryos.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2024
    Article
  8. Article
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  14. Live imaging of echinoderm embryos to illuminate evo-devo.Frontiers in cell and developmental biology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Tufan GökirmakMarine Biology Research Division, Scripps Institution of Oceanography, University of California San Diego, La Jolla, California 92093, USA.
Joseph P Campanale
Lauren E Shipp
Gary W Moy
Houchao Tao
Amro Hamdoun
Scripps Institution of Oceanography · USScripps Research Institute · USUniversity of California, San Diego · US

Funding

Control of Multidrug Transport Activity in EmbryosR00HD058070 · NICHD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMDOUN, AMRO M · 2009 to 2011
$740k
Control of efflux transporter activity by cell surface reorganization in embryos.K99HD058070 · NICHD · STANFORD UNIVERSITY · PI HAMDOUN, AMRO M · 2008 to 2009
$180k
NICHD NIH HHS HD058070NICHD NIH HHS K99 HD058070NICHD NIH HHS R00 HD058070
6 · The paper itself

Abstract

In this study, we cloned, expressed and functionally characterized Stronglycentrotus purpuratus (Sp) ATP-binding cassette (ABC) transporters. This screen identified three multidrug resistance (MDR) transporters with functional homology to the major types of MDR transporters found in humans. When overexpressed in embryos, the apical transporters Sp-ABCB1a, ABCB4a, and ABCG2a can account for as much as 87% of the observed efflux activity, providing a robust assay for their substrate selectivity. Using this assay, we found that sea urchin MDR transporters export canonical MDR susbtrates such as calcein-AM, bodipy-verapamil, bodipy-vinblastine, and mitoxantrone. In addition, we characterized the impact of nonconservative substitutions in the primary sequences of drug binding domains of sea urchin versus murine ABCB1 by mutation of Sp-ABCB1a and treatment of embryos with stereoisomeric cyclic peptide inhibitors (QZ59 compounds). The results indicated that two substitutions in transmembrane helix 6 reverse stereoselectivity of Sp-ABCB1a for QZ59 enantiomers compared with mouse ABCB1a. This suggests that subtle changes in the primary sequence of transporter drug binding domains could fine-tune substrate specificity through evolution.

Indexed as

AnimalsEmbryo, NonmammalianMembrane Transport ProteinsMiceMutationPeptides, CyclicProtein Structure, SecondaryProtein Structure, TertiaryStrongylocentrotus purpuratusSubstrate Specificitycyclic-tris-(R)-valineselenazoleMembrane Transport ProteinsPeptides, Cyclic

Identifiers

PMID23124201
PMCPMC3527970
OpenAlexW2066876478

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.