Evidence map›Paper›PMID 23123093›Full record

ArticleDevelopmental cell2012

Timing of transcriptional quiescence during gametogenesis is controlled by global histone H3K4 demethylation.

Mengshu Xu, Maria Soloveychik, Mathieu Ranger, Michael Schertzberg, Zarna Shah, Ryan Raisner, Shivkumar Venkatasubrahmanyan, Kyle Tsui, Marinella Gebbia, Tim Hughes and 4 more

Abstract read
In one paragraph

Article in Developmental cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Is There a Histone Code for Cellular Quiescence?Frontiers in cell and developmental biology · 2021
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Mengshu XuDepartment of Molecular Genetics, University of Toronto, Toronto M5S 1A8, Canada.
Maria Soloveychik
Mathieu Ranger
Michael Schertzberg
Zarna Shah
Ryan Raisner
Shivkumar Venkatasubrahmanyan
Kyle Tsui
Marinella Gebbia
Tim Hughes
Harm van Bakel
Corey Nislow
Hiten D Madhani
Marc D Meneghini

Funding

Mechanisms of Gene SilencingR01GM071801 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Hiten D Madhani · 2005 to 2026
$7.1M
NIGMS NIH HHS GM071801NIGMS NIH HHS R01 GM071801
6 · The paper itself

Abstract

Gametes are among the most highly specialized cells produced during development. Although gametogenesis culminates in transcriptional quiescence in plants and animals, regulatory mechanisms controlling this are unknown. Here, we confirm that gamete differentiation in the single-celled yeast Saccharomyces cerevisiae is accompanied by global transcriptional shutoff following the completion of meiosis. We show that Jhd2, a highly conserved JARID1-family histone H3K4 demethylase, activates protein-coding gene transcription in opposition to this programmed transcriptional shutoff, sustaining the period of productive transcription during spore differentiation. Moreover, using genome-wide nucleosome, H3K4me, and transcript mapping experiments, we demonstrate that JHD2 globally represses intergenic noncoding transcription during this period. The widespread transcriptional defects of JHD2 mutants are associated with precocious differentiation and the production of stress-sensitive spores, demonstrating that Jhd2 regulation of the global postmeiotic transcriptional program is critical for the production of healthy meiotic progeny.

Indexed as

Epigenesis, GeneticGametogenesisGenes, FungalHistonesJumonji Domain-Containing Histone DemethylasesMeiosisMethylationMutationNucleosomesRibosomal ProteinsRNA, FungalRNA, MessengerSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsShelterin ComplexSpores, FungalHistonesJHD2 protein, S cerevisiaeJumonji Domain-Containing Histone DemethylasesNucleosomesRAP1 protein, S cerevisiaeRibosomal ProteinsRNA, FungalRNA, MessengerSaccharomyces cerevisiae ProteinsShelterin ComplexTelomere-Binding ProteinsTranscription Factors

Identifiers

PMID23123093
PMCPMC3806484

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.