Evidence map›Paper›PMID 23118448›Full record

ArticleJournal of virology2012

Complete genome analysis of three live attenuated Rinderpest virus vaccine strains derived through serial passages in different culture systems.

Hye-Young Jeoung, Myoung-Heon Lee, Jung-Yong Yeh, Ji-Ae Lim, Seong-In Lim, Jae-Ku Oem, Jae-Young Song, Won-Ha Lee, Jong-Hwan Park, Dong-Jun An

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 88% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Hye-Young JeoungAnimal, Plant and Fisheries Quarantine and Inspection Agency, Anyang, Gyeonggi-do, Republic of Korea.
Myoung-Heon Lee
Jung-Yong Yeh
Ji-Ae Lim
Seong-In Lim
Jae-Ku Oem
Jae-Young Song
Won-Ha Lee
Jong-Hwan Park
Dong-Jun An
Animal and Plant Quarantine Agency · KRKyungpook National University · KRKonyang University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genomes of three South Korean Rinderpest virus vaccine strains (L72, LA77, and LA96) were analyzed in order to investigate their genetic variability. These three vaccine strains were all derived from the same virus strain origin (Fusan) through repeated passages in different culture systems. The full genome length of the three strains was 15,882 nucleotides, and the sequence similarity between the three South Korean RPV strains at the nucleotide level was 98.1 to 98.9%. The genetic distance between Nakamura III, L72, LA77, LA96, and LATC06 and the Kabete strain was greater than that between the Fusan and Kabete strains for the P, V, and C genes. The difference in pathogenicity among these strains might be due to the V gene, which has a positive (>1) selection ratio based on the analysis of synonymous (dS) and nonsynonymous (dN) substitution rates (dN/dS ratio [ω]).

Indexed as

Genetic VariationPhylogenyBase SequenceBayes TheoremEvolution, MolecularGenome, ViralModels, GeneticMolecular Sequence DataRepublic of KoreaRinderpest virusSequence Analysis, DNASerial PassageViral VaccinesViral Vaccines

Identifiers

PMID23118448
PMCPMC3497700
OpenAlexW2059227325

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.