Evidence map›Paper›PMID 23116119›Full record

ArticleBiochemistry2012

Serine phosphorylation is critical for the activation of ubiquitin-specific protease 1 and its interaction with WD40-repeat protein UAF1.

Mark A Villamil, Qin Liang, Junjun Chen, Yong Seok Choi, Shuyu Hou, Kelvin H Lee, Zhihao Zhuang

Abstract read
In one paragraph

Article in Biochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Molecular Mechanisms of DUBs Regulation in Signaling and Disease.International journal of molecular sciences · 2021
    Review
  7. Review
  8. Article
  9. Regulation of Deubiquitinating Enzymes by Post-Translational Modifications.International journal of molecular sciences · 2020
    Review
  10. The Role of Deubiquitinases in Vascular Diseases.Journal of cardiovascular translational research · 2020
    Review
  11. Article
  12. Article
  13. An SCFInternational journal of molecular sciences · 2018
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Decision for cell fate: deubiquitinating enzymes in cell cycle checkpoint.Cellular and molecular life sciences : CMLS · 2016
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Mark A VillamilDepartment of Chemistry and Biochemistry, 214A Drake Hall, University of Delaware, Newark, Delaware 19716, United States.
Qin Liang
Junjun Chen
Yong Seok Choi
Shuyu Hou
Kelvin H Lee
Zhihao Zhuang
University of Delaware · US

Funding

VOLUMETRIC BREAST DENSITY ESTIMATION USING BREAST SURFACE RECONSTRUCTEDP20RR016472 · NCRR · UNIVERSITY OF DELAWARE · PI MCLANE, MARY ANN · 2001 to 2011
$37.6M
Regulation and specificity of deubiquitylating enzyme complexR01GM097468 · NIGMS · UNIVERSITY OF DELAWARE · PI ZHUANG, ZHIHAO · 2012 to 2016
$1.3M
NCRR NIH HHS 5P20RR016472-12NCRR NIH HHS P20 RR016472NIGMS NIH HHS R01 GM097468NIGMS NIH HHS R01GM097468
6 · The paper itself

Abstract

Deubiquitinating enzymes (DUBs) are important for the normal function of a number of cellular processes, including transcriptional regulation, cell cycle control, and DNA damage response. The enzymatic activity of DUB is regulated by different mechanisms. DUBs in several different families are post-translationally modified by phosphorylation. Large-scale phosphoproteomic studies of human DUBs revealed that a majority of ubiquitin-specific proteases (USPs) are phosphorylated. USP1 is a prototypical DUB that requires a specific interaction with a WD40-repeat protein, UAF1, for its catalytic activity. In this study, we show that Ser313 phosphorylation in USP1 is required for its interaction with UAF1 and for the stimulation of USP1's activity. In contrast, two other known USP1 serine phosphorylations (Ser42 and Ser67) are dispensable with respect to the activity of the USP1/UAF1 complex. An S313D phosphomimetic mutation in USP1 can substitute for Ser313 phosphorylation in promoting the formation of the USP1/UAF1 complex. We further demonstrated that CDK1 is responsible for Ser313 phosphorylation, and protein phosphatase treatment of USP1 can lead to inactivation of USP1/UAF1. An inserted domain in USP1 (amino acids 235-408) was found to interact with UAF1, and this interaction is mediated by Ser313 phosphorylation. Our findings revealed an intriguing mechanism of regulating USP1 activity that combines phosphorylation of a key serine residue in USP1 and the specific interaction of USP1 with a WD40-repeat protein UAF1. The pSer313-dependent formation of the USP1/UAF1 complex points to a new approach for inhibiting USP1 activity by disrupting the interaction between the UAF1's WD40-repeat domain and the Ser313-containing phosphopeptide in USP1.

Indexed as

Arabidopsis ProteinsEndopeptidasesEnzyme ActivationHumansNuclear ProteinsPhosphorylationSerineUbiquitin-Specific ProteasesArabidopsis ProteinsEndopeptidasesNuclear ProteinsSerineUbiquitin-Specific ProteasesUSP1 protein, humanWDR48 protein, human

Identifiers

PMID23116119
PMCPMC3617561
OpenAlexW2030398428

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.