Evidence map›Paper›PMID 23114760›Full record

ArticleAntimicrobial agents and chemotherapy2013

GES-18, a new carbapenem-hydrolyzing GES-Type β-lactamase from Pseudomonas aeruginosa that contains Ile80 and Ser170 residues.

Carine Bebrone, Pierre Bogaerts, Heinrich Delbrück, Sandra Bennink, Michaël B Kupper, Roberta Rezende de Castro, Youri Glupczynski, Kurt M Hoffmann

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. The biogenesis of β-lactamase enzymes.Microbiology (Reading, England) · 2022
    Review
  6. Laboratory Variants GESAntimicrobial agents and chemotherapy · 2021
    Article
  7. Mobile Carbapenemase Genes inFrontiers in microbiology · 2021
    Review
  8. Review
  9. Article
  10. Article
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  12. Article
  13. Article
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  15. Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Carine BebroneInstitute of Molecular Biotechnology, RWTH-Aachen University, c/o Fraunhofer IME, Aachen, Germany. carine.bebrone@molbiotech
Pierre Bogaerts
Heinrich Delbrück
Sandra Bennink
Michaël B Kupper
Roberta Rezende de Castro
Youri Glupczynski
Kurt M Hoffmann
Fraunhofer Institute for Molecular Biology and Applied Ecology · DEUCLouvain · BERWTH Aachen University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A clinical isolate of Pseudomonas aeruginosa recovered from the lower respiratory tract of an 81-year-old patient hospitalized in Belgium was sent to the national reference center to determine its resistance mechanism. PCR sequencing identified a new GES variant, GES-18, which differs from the carbapenem-hydrolyzing enzyme GES-5 by a single amino acid substitution (Val80Ile, in the numbering according to Ambler) and from GES-1 by two substitutions (Val80Ile and Gly170Ser). Detailed kinetic characterization showed that GES-18 and GES-5 hydrolyze imipenem and cefoxitin with similar kinetic parameters and that GES-18 was less susceptible than GES-1 to classical β-lactamase inhibitors such as clavulanate and tazobactam. The overall structure of GES-18 is similar to the solved structures of GES-1 and GES-2, the Val80Ile and Gly170Ser substitutions causing only subtle local rearrangements. Notably, the hydrolytic water molecule and the Glu166 residue were slightly displaced compared to their counterparts in GES-1. Our kinetic and crystallographic data for GES-18 highlight the pivotal role of the Gly170Ser substitution which distinguishes GES-5 and GES-18 from GES-1.

Indexed as

Aged, 80 and overAmino Acid SequenceAmino Acid SubstitutionAnti-Bacterial Agentsbeta-Lactamasesbeta-LactamsCatalytic DomainCloning, MolecularCrystallography, X-RayEscherichia coliHumansKineticsMaleMicrobial Sensitivity TestsModels, MolecularMolecular Sequence DataAnti-Bacterial Agentsbeta-Lactamasesbeta-LactamsRecombinant Proteins

Identifiers

PMID23114760
PMCPMC3535894
OpenAlexW2121738061

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.