Evidence map›Paper›PMID 23112171›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Plasmodium falciparum responds to amino acid starvation by entering into a hibernatory state.

Shalon E Babbitt, Lindsey Altenhofen, Simon A Cobbold, Eva S Istvan, Clare Fennell, Christian Doerig, Manuel Llinás, Daniel E Goldberg

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 172 citations in OpenAlex.

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  10. Immune regulation of host energy metabolism and periodicity of malaria parasites.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
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34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Shalon E BabbittDepartment of Medicine, Washington University School of Medicine, St. Louis, MO 63110, USA.
Lindsey Altenhofen
Simon A Cobbold
Eva S Istvan
Clare Fennell
Christian Doerig
Manuel Llinás
Daniel E Goldberg
Princeton University · USWashington University in St. Louis · USHoward Hughes Medical Institute · USUniversity of Glasgow · GBWellcome Centre for Molecular Parasitology · GB

Funding

Spatial Patterning During DevelopmentP50GM071508 · NIGMS · PRINCETON UNIVERSITY · PI POWELL, SUSAN M · 2004 to 2013
$30.6M
Novel antimalarial strategies using metabolomic network discoveryDP2OD001315 · OD · PRINCETON UNIVERSITY · PI LLINAS, MANUEL · 2007 to 2007
$2.4M
NIGMS NIH HHS P50 GM071508NIH HHS 1DP2OD001315NIH HHS DP2 OD001315
6 · The paper itself

Abstract

The human malaria parasite Plasmodium falciparum is auxotrophic for most amino acids. Its amino acid needs are met largely through the degradation of host erythrocyte hemoglobin; however the parasite must acquire isoleucine exogenously, because this amino acid is not present in adult human hemoglobin. We report that when isoleucine is withdrawn from the culture medium of intraerythrocytic P. falciparum, the parasite slows its metabolism and progresses through its developmental cycle at a reduced rate. Isoleucine-starved parasites remain viable for 72 h and resume rapid growth upon resupplementation. Protein degradation during starvation is important for maintenance of this hibernatory state. Microarray analysis of starved parasites revealed a 60% decrease in the rate of progression through the normal transcriptional program but no other apparent stress response. Plasmodium parasites do not possess a TOR nutrient-sensing pathway and have only a rudimentary amino acid starvation-sensing eukaryotic initiation factor 2α (eIF2α) stress response. Isoleucine deprivation results in GCN2-mediated phosphorylation of eIF2α, but kinase-knockout clones still are able to hibernate and recover, indicating that this pathway does not directly promote survival during isoleucine starvation. We conclude that P. falciparum, in the absence of canonical eukaryotic nutrient stress-response pathways, can cope with an inconsistent bloodstream amino acid supply by hibernating and waiting for more nutrient to be provided.

Indexed as

HibernationAnimalsArtemisininsCarbonEukaryotic Initiation Factor-2BGene Expression ProfilingGene Expression RegulationGenes, ProtozoanHumansIsoleucineMetabolomeParasitesPeptide HydrolasesPhenotypePhosphorylationPlasmodium falciparumArtemisininsCarbonEukaryotic Initiation Factor-2BIsoleucinePeptide HydrolasesProtozoan Proteins

Identifiers

PMID23112171
PMCPMC3511138
OpenAlexW2099767800

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.