Evidence map›Paper›PMID 23110365›Full record

ArticleBMC genomics2012

QTL mapping of the production of wine aroma compounds by yeast.

Damien Steyer, Chloe Ambroset, Christian Brion, Patricia Claudel, Pierre Delobel, Isabelle Sanchez, Claude Erny, Bruno Blondin, Francis Karst, Jean-Luc Legras

Abstract read
In one paragraph

Article in BMC genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Truth in wine yeast.Microbial biotechnology · 2022
    Review
  7. Article
  8. Article
  9. Article
  10. Marker Assisted Selection of Malic-ConsumingJournal of fungi (Basel, Switzerland) · 2021
    Article
  11. Metabolic, Organoleptic and Transcriptomic Impact ofInternational journal of molecular sciences · 2021
    Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Damien SteyerINRA, UMR1131, Colmar F-68021, France.
Chloe Ambroset
Christian Brion
Patricia Claudel
Pierre Delobel
Isabelle Sanchez
Claude Erny
Bruno Blondin
Francis Karst
Jean-Luc Legras

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWine aroma results from the combination of numerous volatile compounds, some produced by yeast and others produced in the grapes and further metabolized by yeast. However, little is known about the consequences of the genetic variation of yeast on the production of these volatile metabolites, or on the metabolic pathways involved in the metabolism of grape compounds. As a tool to decipher how wine aroma develops, we analyzed, under two experimental conditions, the production of 44 compounds by a population of 30 segregants from a cross between a laboratory strain and an industrial strain genotyped at high density.

resultsWe detected eight genomic regions explaining the diversity concerning 15 compounds, some produced de novo by yeast, such as nerolidol, ethyl esters and phenyl ethanol, and others derived from grape compounds such as citronellol, and cis-rose oxide. In three of these eight regions, we identified genes involved in the phenotype. Hemizygote comparison allowed the attribution of differences in the production of nerolidol and 2-phenyl ethanol to the PDR8 and ABZ1 genes, respectively. Deletion of a PLB2 gene confirmed its involvement in the production of ethyl esters. A comparison of allelic variants of PDR8 and ABZ1 in a set of available sequences revealed that both genes present a higher than expected number of non-synonymous mutations indicating possible balancing selection.

conclusionsThis study illustrates the value of QTL analysis for the analysis of metabolic traits, and in particular the production of wine aromas. It also identifies the particular role of the PDR8 gene in the production of farnesyldiphosphate derivatives, of ABZ1 in the production of numerous compounds and of PLB2 in ethyl ester synthesis. This work also provides a basis for elucidating the metabolism of various grape compounds, such as citronellol and cis-rose oxide.

Indexed as

Quantitative Trait LociAcyclic MonoterpenesAllelesChromosome MappingFermentationGene DeletionGenetic VariationMetabolic Networks and PathwaysMonoterpenesOdorantsOrganic ChemicalsSaccharomyces cerevisiaeSesquiterpenesVitisWineAcyclic MonoterpenescitronellolMonoterpenesnerolidolOrganic ChemicalsSesquiterpenes

Identifiers

PMID23110365
PMCPMC3575298

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.