Evidence map›Paper›PMID 23110254›Full record

ArticleeLife2012

Sequence specific detection of bacterial 23S ribosomal RNA by TLR13.

Xiao-Dong Li, Zhijian James Chen

Open access · goldAbstract read
In one paragraph

Article in eLife, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 156 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. Review
  7. RNase T2 restricts TLR13-mediated autoinflammation in vivo.The Journal of experimental medicine · 2025
    Article
  8. Article
  9. Article
  10. Sterile activation of RNA-sensing pathways in autoimmunity.Journal of molecular cell biology · 2024
    Review
  11. miR-574-5p in epigenetic regulation and Toll-like receptor signaling.Cell communication and signaling : CCS · 2024
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Xiao-Dong LiDepartment of Molecular Biology.
Zhijian James Chen
The University of Texas Southwestern Medical Center · US

Funding

Ubiquitin-Mediated Activation of the IkB Kinase ComplexR01GM063692 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI CHEN, ZHIJIAN J · 2001 to 2014
$3.5M
Biochemical Dissection of the RIG-I Antiviral PathwayR01AI093967 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI CHEN, ZHIJIAN J · 2011 to 2015
$2.0M
Howard Hughes Medical Institute 800635NIAID NIH HHS R01 AI093967NIGMS NIH HHS R01 GM063692
6 · The paper itself

Abstract

Toll-like receptors (TLRs) detect microbial infections and trigger innate immune responses. Among vertebrate TLRs, the role of TLR13 and its ligand are unknown. Here we show that TLR13 detects the 23S ribosomal RNA of both gram-positive and gram-negative bacteria. A sequence containing 13 nucleotides near the active site of 23S rRNA ribozyme, which catalyzes peptide bond synthesis, was both necessary and sufficient to trigger TLR13-dependent interleukin-1β production. Single point mutations within this sequence destroyed the ability of the 23S rRNA to stimulate the TLR13 pathway. Knockout of TLR13 in mice abolished the induction of interleukin-1β and other cytokines by the 23S rRNA sequence. Thus, TLR13 detects bacterial RNA with exquisite sequence specificity.DOI:http://dx.doi.org/10.7554/eLife.00102.001.

Indexed as

AnimalsBase SequenceCells, CulturedDendritic CellsEscherichia coliGene ExpressionImmunity, InnateInterleukin-1betaLactobacillusMacrophagesMiceMice, KnockoutMolecular Sequence DataRNA, BacterialRNA, Ribosomal, 23SRNA, Small InterferingInterleukin-1betaRNA, BacterialRNA, Ribosomal, 23SRNA, Small InterferingTlr13 protein, mouseToll-Like ReceptorsbacteriaE. coliInnate ImmunityMouseRibosomal RNAToll-like receptor

Identifiers

PMID23110254
PMCPMC3482692
OpenAlexW2100019645

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.