ArticlePloS one2012
Genome-wide identification and characterization of R2R3MYB family in Cucumis sativus.
Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.
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Who cites it
38 citing papers in PubMed, 73 citations in OpenAlex.
- Review
- Large-scale analysis of MYB genes in Cucurbitaceae identifies a novel gene regulating plant height.Horticulture research · 2025Article
- Phylogenetic and functional analysis of MYB genes unraveling its role involved in anthocyanin biosynthesis in H macrophylla.Scientific reports · 2025Article
- MYB transcription factors, their regulation and interactions with non-coding RNAs during drought stress in Brassica juncea.BMC plant biology · 2024Article
- Regulation of Anthocyanin Accumulation in TomatoPlants (Basel, Switzerland) · 2024Article
- Genome-Wide Analysis of Transcription FactorGenes · 2024Article
- Review
- Genome-wide characterization of R2R3-MYB gene family inFrontiers in plant science · 2023Article
- Genome-Wide Characterization and Analysis of R2R3-MYB Genes Related to Fruit Ripening and Stress Response in Banana (Plants (Basel, Switzerland) · 2022Article
- Article
- Evolution and functional diversification of R2R3-MYB transcription factors in plants.Horticulture research · 2022Article
- Genome-wide analysis of MYB transcription factors of Vaccinium corymbosum and their positive responses to drought stress.BMC genomics · 2021Article
- Gene expression underlying floral epidermal specialization in Aristolochia fimbriata (Aristolochiaceae).Annals of botany · 2021Article
- The Basic Helix-Loop-Helix Transcription Factor SmbHLH1 Represses Anthocyanin Biosynthesis in Eggplant.Frontiers in plant science · 2021Article
- Insights into the Diversification and Evolution of R2R3-MYB Transcription Factors in Plants.Plant physiology · 2020Article
- Identification and Expression Analysis of theFrontiers in genetics · 2020Article
- MYB Gene Family in Potato (International journal of molecular sciences · 2019Article
- Transcriptional regulation of osmotic stress tolerance in wheat (Triticum aestivum L.).Plant molecular biology · 2018Review
- Genome-Wide Identification and Expression Analyses of the Fibrillin Family Genes Suggest Their Involvement in Photoprotection in Cucumber.Plants (Basel, Switzerland) · 2018Article
- A CsMYB6-CsTRY module regulates fruit trichome initiation in cucumber.Journal of experimental botany · 2018Article
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Authors and funding
5 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundThe R2R3MYB proteins comprise one of the largest families of transcription factors in plants. Although genome-wide analysis of this family has been carried out in some species, little is known about R2R3MYB genes in cucumber (Cucumis sativus L.). PRINCIPAL
findingsThis study has identified 55 R2R3MYB genes in the latest cucumber genome and the CsR2R3MYB family contained the smallest number of identified genes compared to other species that have been studied due to the absence of recent gene duplication events. These results were also supported by genome distribution and gene duplication analysis. Phylogenetic analysis showed that they could be classified into 11 subgroups. The evolutionary relationships and the intron-exon organizations that showed similarities with Arabidopsis, Vitis and Glycine R2R3MYB proteins were also analyzed and suggested strong gene conservation but also the expansions of particular functional genes during the evolution of the plant species. In addition, we found that 8 out of 55 (∼14.54%) cucumber R2R3MYB genes underwent alternative splicing events, producing a variety of transcripts from a single gene, which illustrated the extremely high complexity of transcriptome regulation. Tissue-specific expression profiles showed that 50 cucumber R2R3MYB genes were expressed in at least one of the tissues and the other 5 genes showed very low expression in all tissues tested, which suggested that cucumber R2R3MYB genes took part in many cellular processes. The transcript abundance level analysis during abiotic conditions (NaCl, ABA and low temperature treatments) identified a group of R2R3MYB genes that responded to one or more treatments.
conclusionsThis study has produced a comparative genomics analysis of the cucumber R2R3MYB gene family and has provided the first steps towards the selection of CsR2R3MYB genes for cloning and functional dissection that can be used in further studies to uncover their roles in cucumber growth and development.
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