Evidence map›Paper›PMID 23108367›Full record

ArticleHuman genetics2013

Positive natural selection of TRIB2, a novel gene that influences visceral fat accumulation, in East Asia.

Kazuhiro Nakayama, Ayumi Ogawa, Hiroshi Miyashita, Yasuharu Tabara, Michiya Igase, Katsuhiko Kohara, Tetsuro Miki, Yasuo Kagawa, Yoshiko Yanagisawa, Mitsuhiro Katashima and 4 more

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Article in Human genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. miR-100-5p Regulates Skeletal Muscle Myogenesis through theInternational journal of molecular sciences · 2023
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  10. Novel genomic signals of recent selection in an Ethiopian population.European journal of human genetics : EJHG · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Kazuhiro NakayamaDivision of Human Genetics, Center for Molecular Medicine, Jichi Medical University, Yakushiji, Shimotsuke, Tochigi, Japan. nakayama@jichi.ac.jp
Ayumi Ogawa
Hiroshi Miyashita
Yasuharu Tabara
Michiya Igase
Katsuhiko Kohara
Tetsuro Miki
Yasuo Kagawa
Yoshiko Yanagisawa
Mitsuhiro Katashima
Tomohiro Onda
Koichi Okada
Shogo Fukushima
Sadahiko Iwamoto
Jichi Medical University · JPEhime University · JPKao Corporation (Japan) · JPPanasonic (Japan) · JPKagawa Nutrition University · JPKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accumulation of visceral fat increases cardiovascular mortality in industrialized societies. However, during the evolution of the modern human, visceral fat may have acted as energy storage facility to survive in times of famine. Therefore, past natural selection might contribute to shaping the variation of visceral fat accumulation in present populations. Here, we report that the gene encoding tribbles homolog 2 (TRIB2) influenced visceral fat accumulation and was operated by recent positive natural selection in East Asians. Our candidate gene association analysis on 11 metabolic traits of 5,810 East Asians revealed that rs1057001, a T/A transversion polymorphism in 3'untranslated region (UTR) of TRIB2, was strongly associated with visceral fat area (VFA) and waist circumference adjusted for body mass index (P = 2.7 × 10(-6) and P = 9.0 × 10(-6), respectively). rs1057001 was in absolute linkage disequilibrium with a conserved insertion-deletion polymorphism in the 3'UTR and was associated with allelic imbalance of TRIB2 transcript levels in adipose tissues. rs1057001 showed high degree of interpopulation variation of the allele frequency; the low-VFA-associated A allele was found with high frequencies in East Asians. Haplotypes containing the rs1057001 A allele exhibited a signature of a selective sweep, which may have occurred 16,546-27,827 years ago in East Asians. Given the predominance of the thrifty gene hypothesis, it is surprising that the apparently non-thrifty allele was selectively favored in the evolution of modern humans. Environmental/physiological factors other than famine would be needed to explain the non-neutral evolution of TRIB2 in East Asians.

Indexed as

Selection, GeneticAllelesAllelic ImbalanceAsia, EasternAsian PeopleCalcium-Calmodulin-Dependent Protein KinasesEvolution, MolecularGene Expression RegulationGene FrequencyGenome-Wide Association StudyHumansIntra-Abdominal FatIntracellular Signaling Peptides and ProteinsObesity, AbdominalPolymorphism, Single NucleotideCalcium-Calmodulin-Dependent Protein KinasesIntracellular Signaling Peptides and ProteinsTRIB2 protein, human

Identifiers

PMID23108367
OpenAlexW1985724069

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.