Evidence map›Paper›PMID 23105130›Full record

ArticleJournal of experimental botany2012

Modulation of plant TPC channels by polyunsaturated fatty acids.

Paul Vijay Kanth Gutla, Anna Boccaccio, Alexis De Angeli, Franco Gambale, Armando Carpaneto

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Molecular Approaches Reduce Saturates and EliminateFrontiers in plant science · 2022
    Review
  6. Article
  7. Review
  8. Structural basis for activation of voltage sensor domains in an ion channel TPC1.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Plant salt stress status is transmitted systemically via propagating calcium waves.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  19. Plant calcium-permeable channels.Plant physiology · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Paul Vijay Kanth GutlaIstituto di Biofisica, Consiglio Nazionale delle Ricerche, Via De Marini 6, 16149 Genova, Italy.
Anna Boccaccio
Alexis De Angeli
Franco Gambale
Armando Carpaneto
Instituto Biofisika · ESUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyunsaturated fatty acids (PUFAs) are powerful modulators of several animal ion channels. It is shown here that PUFAs strongly affect the activity of the Slow Vacuolar (SV) channel encoded by the plant TPC1 gene. The patch-clamp technique was applied to isolated vacuoles from carrot taproots and Arabidopsis thaliana mesophyll cells and arachidonic acid (AA) was chosen as a model molecule for PUFAs. Our study was extended to different PUFAs including the endogenous alpha-linolenic acid (ALA). The addition of micromolar concentrations of AA reversibly inhibited the SV channel decreasing the maximum open probability and shifting the half activation voltage to positive values. Comparing the effects of different PUFAs, it was found that the length of the lipophilic acyl chain, the number of double bonds and the polar head were critical for channel modulation.The experimental data can be reproduced by a simple three-state model, in which PUFAs do not interact directly with the voltage sensors but affect the voltage-independent transition that leads the channel from the open state to the closed configuration. The results indicate that lipids play an important role in co-ordinating ion channel activities similar to what is known from animal cells.

Indexed as

alpha-Linolenic AcidArabidopsisArabidopsis ProteinsArachidonic AcidCalciumCalcium ChannelsDaucus carotaElectrophysiologyFatty Acids, UnsaturatedIon Channel GatingIon ChannelsKineticsLinoleic AcidMembrane PotentialsMesophyll CellsModels, Biologicalalpha-Linolenic AcidArabidopsis ProteinsArachidonic AcidCalciumCalcium ChannelsFatty Acids, UnsaturatedIon ChannelsLinoleic AcidOleic AcidsPlant ProteinsTPC1 protein, ArabidopsisTwo-Pore Channels

Identifiers

PMID23105130
PMCPMC3481210
OpenAlexW2127462604

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.