Evidence map›Paper›PMID 23105112›Full record

ArticleThe Journal of biological chemistry2012

The effects of transmembrane sequence and dimerization on cleavage of the p75 neurotrophin receptor by γ-secretase.

Alex M Sykes, Nickless Palstra, Daniel Abankwa, Justine M Hill, Sune Skeldal, Dusan Matusica, Prahatha Venkatraman, John F Hancock, Elizabeth J Coulson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. FLIM-FRET Analysis of Ras Nanoclustering and Membrane-Anchorage.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  8. Article
  9. Fast-diffusing p75Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  10. Stoichiometry counts.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Structural Basis of p75 Transmembrane Domain Dimerization.The Journal of biological chemistry · 2016
    Article
  17. Death Domain Signaling by Disulfide-Linked Dimers of the p75 Neurotrophin Receptor Mediates Neuronal Death in the CNS.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2016
    Article
  18. Review
  19. Detection of p75NTR Trimers: Implications for Receptor Stoichiometry and Activation.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2015
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Alex M SykesQueensland Brain Institute, University of Queensland, Brisbane, Queensland 4072, Australia.
Nickless Palstra
Daniel Abankwa
Justine M Hill
Sune Skeldal
Dusan Matusica
Prahatha Venkatraman
John F Hancock
Elizabeth J Coulson
The University of Queensland · AUAllen Institute for Brain Science · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cleavage of transmembrane receptors by γ-secretase is the final step in the process of regulated intramembrane proteolysis (RIP) and has a significant impact on receptor function. Although relatively little is known about the molecular mechanism of γ-secretase enzymatic activity, it is becoming clear that substrate dimerization and/or the α-helical structure of the substrate can regulate the site and rate of γ-secretase activity. Here we show that the transmembrane domain of the pan-neurotrophin receptor p75(NTR), best known for regulating neuronal death, is sufficient for its homodimerization. Although the p75(NTR) ligands NGF and pro-NGF do not induce homerdimerization or RIP, homodimers of p75(NTR) are γ-secretase substrates. However, dimerization is not a requirement for p75(NTR) cleavage, suggesting that γ-secretase has the ability to recognize and cleave each receptor molecule independently. The transmembrane cysteine 257, which mediates covalent p75(NTR) interactions, is not crucial for homodimerization, but this residue is required for normal rates of γ-secretase cleavage. Similarly, mutation of the residues alanine 262 and glycine 266 of an AXXXG dimerization motif flanking the γ-secretase cleavage site within the p75(NTR) transmembrane domain alters the orientation of the domain and inhibits γ-secretase cleavage of p75(NTR). Nonetheless, heteromer interactions of p75(NTR) with TrkA increase full-length p75(NTR) homodimerization, which in turn potentiates the rate of γ-cleavage following TrkA activation independently of rates of α-cleavage. These results provide support for the idea that the helical structure of the p75(NTR) transmembrane domain, which may be affected by co-receptor interactions, is a key element in γ-secretase-catalyzed cleavage.

Indexed as

ProteolysisAmino Acid MotifsAmyloid Precursor Protein SecretasesAnimalsCell DeathCysteineEnzyme ActivationHEK293 CellsHumansNerve Growth FactorNerve Growth FactorsNerve Tissue ProteinsPC12 CellsProtein MultimerizationProtein PrecursorsProtein Structure, TertiaryAmyloid Precursor Protein SecretasesCysteineNerve Growth FactorNerve Growth FactorsNerve Tissue ProteinsNGFR protein, humanNgfr protein, ratpro-nerve growth factor, humanpro-nerve growth factor, ratProtein PrecursorsReceptors, Growth FactorReceptors, Nerve Growth FactorReceptor, trkA

Identifiers

PMID23105112
PMCPMC3527965
OpenAlexW2008745620

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.