Evidence map›Paper›PMID 23105021›Full record

ArticleJournal of medical microbiology2013

Invasive candidiasis in Pakistan: clinical characteristics, species distribution and antifungal susceptibility.

J Q Farooqi, K Jabeen, N Saeed, N Iqbal, B Malik, S R Lockhart, A Zafar, M E Brandt, R Hasan

Open access · greenAbstract read
In one paragraph

Article in Journal of medical microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 58 citations in OpenAlex.

  1. Pooled it
  2. Validation of molecular detection ofMicrobiology spectrum · 2026
    Article
  3. First Case of Candidemia With Fluconazole-ResistantCase reports in infectious diseases · 2026
    Article
  4. Impact ofPathogens (Basel, Switzerland) · 2025
    Observational
  5. Article
  6. Review
  7. Review
  8. Article
  9. The emerging threat antifungal-resistantFrontiers in fungal biology · 2022
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Changes in the epidemiological landscape of invasive candidiasis.The Journal of antimicrobial chemotherapy · 2018
    Review
  19. Serious fungal infections in Pakistan.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2017
    Article
  20. Simultaneous Emergence of Multidrug-Resistant Candida auris on 3 Continents Confirmed by Whole-Genome Sequencing and Epidemiological Analyses.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

J Q FarooqiDepartment of Pathology Microbiology, Aga Khan Hospital Karachi, Pakistan.
K JabeenDepartment of Pathology Microbiology, Aga Khan Hospital Karachi, Pakistan.
N SaeedDepartment of Pathology Microbiology, Aga Khan Hospital Karachi, Pakistan.
N IqbalMycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, GA, USA.
B MalikDepartment of Pathology Microbiology, Aga Khan Hospital Karachi, Pakistan.
S R LockhartMycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, GA, USA.
A ZafarDepartment of Pathology Microbiology, Aga Khan Hospital Karachi, Pakistan.
M E BrandtMycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, GA, USA.
R HasanDepartment of Pathology Microbiology, Aga Khan Hospital Karachi, Pakistan.
Aga Khan University Hospital · PKCenters for Disease Control and Prevention · US

Funding

Intramural CDC HHS CC999999
6 · The paper itself

Abstract

This study reports for the first time, to our knowledge, descriptive epidemiological data for 188 invasive Candida isolates from Pakistan, including species identification and antifungal susceptibility against fluconazole, itraconazole, voriconazole, caspofungin, micafungin, anidulafungin and amphotericin. Risk factors for invasive candidiasis (IC) were determined for 96 patients from Karachi, Pakistan. In adults and neonates, Candida tropicalis (38 and 36 %, respectively) was the most common species, followed in adults by Candida parapsilosis (17.8 %), Candida glabrata (15.9 %) and Candida albicans (12.3 %). C. albicans (21 %) was the second most common in neonates. In children, C. albicans (31.9 %), C. tropicalis (26.4 %) and C. parapsilosis (19.4 %) were the most common. C. albicans IC was significantly associated with paediatric age [crude odds ratio (COR) 3.46, 95 % confidence interval (CI) 1.63-7.32]. Rare species made up 17.5 % of the total isolates studied. Resistance to fluconazole was seen in C. glabrata (15 .0%) and Candida krusei (100 .0%). Only one isolate (C. glabrata) was resistant to all three echinocandins. Low MICs of fluconazole for 98 % (184/188) of isolates tested support its continued use as an empiric therapy for IC. Non-C. albicans IC was associated with the use of β-lactam inhibitor combinations (COR 3.16, 95 % CI 1.05-9.57). Use of healthcare devices was documented in 85.4 % of IC patients, whilst 75 .0% had been admitted to special care units. Surprisingly, 66.7 % of patients with IC were not obviously immunosuppressed. The high frequency of modifiable risk factors in this population indicates that candidaemia can be reduced with stringent antibiotic and infection control measures. These data will be useful for empiric selection of antifungals in Karachi, and contribute to global assessments of antifungal resistance.

Indexed as

CandidaAdolescentAdultAgedAged, 80 and overAntifungal AgentsCandidiasis, InvasiveChildChild, PreschoolDrug Resistance, FungalFemaleHumansInfantInfant, NewbornMaleMicrobial Sensitivity TestsAntifungal Agents

Identifiers

PMID23105021
PMCPMC4629241
OpenAlexW2170792133

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.