Evidence map›Paper›PMID 23104861›Full record

ArticlePlant physiology2013

Group III-A XTH genes of Arabidopsis encode predominant xyloglucan endohydrolases that are dispensable for normal growth.

Nomchit Kaewthai, Delphine Gendre, Jens M Eklöf, Farid M Ibatullin, Ines Ezcurra, Rishikesh P Bhalerao, Harry Brumer

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 88 citations in OpenAlex.

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  3. Functional Analysis of the GH16 Domain-ContainingPlants (Basel, Switzerland) · 2026
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  5. Genome-Wide Analyses of theInternational journal of molecular sciences · 2025
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  6. Structure and growth of plant cell walls.Nature reviews. Molecular cell biology · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Plant direct · 2023
    Article
  12. Article
  13. Identification of the Xyloglucan Endotransglycosylase/Hydrolase (International journal of molecular sciences · 2022
    Article
  14. Exogenous Melatonin Improves Seed Germination of Wheat (International journal of molecular sciences · 2022
    Article
  15. Article
  16. Building an extensible cell wall.Plant physiology · 2022
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Nomchit KaewthaiDivision of Glycoscience, School of Biotechnology, Royal Institute of Technology, AlbaNova University Centre, S-106 91 Stockholm, Sweden.
Delphine Gendre
Jens M Eklöf
Farid M Ibatullin
Ines Ezcurra
Rishikesh P Bhalerao
Harry Brumer
Swedish University of Agricultural Sciences · SEAlbaNova · SEUmeå Plant Science Centre · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The molecular basis of primary wall extension endures as one of the central enigmas in plant cell morphogenesis. Classical cell wall models suggest that xyloglucan endo-transglycosylase activity is the primary catalyst (together with expansins) of controlled cell wall loosening through the transient cleavage and religation of xyloglucan-cellulose cross links. The genome of Arabidopsis (Arabidopsis thaliana) contains 33 phylogenetically diverse XYLOGLUCAN ENDO-TRANSGLYCOSYLASE/HYDROLASE (XTH) gene products, two of which were predicted to be predominant xyloglucan endohydrolases due to clustering into group III-A. Enzyme kinetic analysis of recombinant AtXTH31 confirmed this prediction and indicated that this enzyme had similar catalytic properties to the nasturtium (Tropaeolum majus) xyloglucanase1 responsible for storage xyloglucan hydrolysis during germination. Global analysis of Genevestigator data indicated that AtXTH31 and the paralogous AtXTH32 were abundantly expressed in expanding tissues. Microscopy analysis, utilizing the resorufin β-glycoside of the xyloglucan oligosaccharide XXXG as an in situ probe, indicated significant xyloglucan endohydrolase activity in specific regions of both roots and hypocotyls, in good correlation with transcriptomic data. Moreover, this hydrolytic activity was essentially completely eliminated in AtXTH31/AtXTH32 double knockout lines. However, single and double knockout lines, as well as individual overexpressing lines, of AtXTH31 and AtXTH32 did not demonstrate significant growth or developmental phenotypes. These results suggest that although xyloglucan polysaccharide hydrolysis occurs in parallel with primary wall expansion, morphological effects are subtle or may be compensated by other mechanisms. We hypothesize that there is likely to be an interplay between these xyloglucan endohydrolases and recently discovered apoplastic exo-glycosidases in the hydrolytic modification of matrix xyloglucans.

Indexed as

Genes, PlantAmino Acid SequenceArabidopsisArabidopsis ProteinsCell WallEnzyme ActivationEnzyme AssaysGene Knockout TechniquesGerminationGlucansGlycosyltransferasesHydrolysisHypocotylMolecular Sequence DataPectinsPhylogenyArabidopsis ProteinsGlucansGlycosyltransferasesPectinsRecombinant Proteinsrhamnogalacturonan IXylansxyloglucanxyloglucan - xyloglucosyltransferase

Identifiers

PMID23104861
PMCPMC3532273
OpenAlexW2028520620

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.