Evidence map›Paper›PMID 23104336›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2013

Improved vectors for selection of transgenic Caenorhabditis elegans.

Annabel A Ferguson, Liquan Cai, Luv Kashyap, Alfred L Fisher

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. HspB1 Overexpression Improves Life Span and Stress Resistance in an Invertebrate Model.The journals of gerontology. Series A, Biological sciences and medical sciences · 2022
    Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Annabel A FergusonDivision of Geriatric Medicine, Department of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
Liquan Cai
Luv Kashyap
Alfred L Fisher

Funding

Effects of insulin-like signaling, aging, and ubiquinone on C. elegans muscleR01AG044768 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI FISHER, ALFRED L · 2012 to 2016
$1.6M
Regulation on of the AIRAP/aip-1 pathway by metabolic stressR01ES017761 · NIEHS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI FISHER, ALFRED L · 2010 to 2014
$1.1M
NIA NIH HHS R01 AG044768NIEHS NIH HHS R01 ES017761
6 · The paper itself

Abstract

The generation of transgenic animals is an essential part of research in Caenorhabditis elegans. One technique for the generation of these animals is biolistic bombardment involving the use of DNA-coated microparticles. To facilitate the identification of transgenic animals within a background of non-transformed animals, the unc-119 gene is often used as a visible marker as the unc-119 mutants are small and move poorly and the larger size and smoother movement of rescued animals make them clearly visible. While transgenic animals can be identified from co-bombardment with a transgene of interest and a separate unc-119 rescue plasmid, placing the unc-119 in cis on the transgene increases confidence that the resulting transgenic animals contain and express both the marker and the transgene. However, placing the unc-119 marker on the backbone of a plasmid or larger DNA construct, such as a fosmid or BAC, can be technically difficult using standard molecular biology techniques. Here we describe methods to circumvent these limitations and use either homologous recombination or Cre-LoxP mediated recombination in Escherichia coli to insert the unc-119 marker on to a variety of vector backbones.

Indexed as

AmpicillinAnimalsAnimals, Genetically ModifiedCaenorhabditis elegansCaenorhabditis elegans ProteinsDeoxyribonucleases, Type II Site-SpecificDrug Resistance, BacterialElectroporationEscherichia coliGenetic EngineeringGenetic VectorsHomologous RecombinationKanamycinNerve Tissue ProteinsPlasmidsPolymerase Chain ReactionAmpicillinCaenorhabditis elegans ProteinsDeoxyribonucleases, Type II Site-Specificendodeoxyribonuclease ScaIKanamycinNerve Tissue ProteinsUNC-119 protein, C elegans

Identifiers

PMID23104336
PMCPMC3965178

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.