Evidence map›Paper›PMID 23102969›Full record

ArticleVirology2013

P-body components LSM1, GW182, DDX3, DDX6 and XRN1 are recruited to WNV replication sites and positively regulate viral replication.

Harendra S Chahar, Shuiping Chen, N Manjunath

Abstract read
In one paragraph

Article in Virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 143 citations in OpenAlex.

  1. Article
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  3. Article
  4. Review
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  8. Article
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  11. Restriction of Flaviviruses by an Interferon-Stimulated Gene SHFL/C19orf66.International journal of molecular sciences · 2022
    Review
  12. Review
  13. Review
  14. Article
  15. The human DEAD-box helicase DDX3X as a regulator of mRNA translation.Frontiers in cell and developmental biology · 2022
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Harendra S ChaharCenter of Excellence in Infectious Disease Research, Department of Biomedical Sciences, Paul L. Foster School of Medicine, Texas Tech University Health Sciences Center, El Paso, TX, USA.
Shuiping Chen
N Manjunath
Texas Tech University · US

Funding

BROAD-SPECTRUM RNAi THERAPEUTICS FOR FLAVIVIRAL ENCEPHALITISU01AI075419 · NIAID · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI SWAMY, MANJUNATH NARASIMHA · 2007 to 2009
$2.9M
NIAID NIH HHS U01 AI075419NIAID NIH HHS U01AI075419
6 · The paper itself

Abstract

In mammalian cells, proteins involved in mRNA silencing and degradation localize to discrete cytoplasmic foci called processing or P-bodies. Here we show that microscopically visible P-bodies are greatly diminished following West Nile viral infection, but the component proteins are not depleted. On the other hand, many P-body components including LSM1, GW182, DDX3, DDX6 and XRN1, but not others like DCP1a and EDC4 are recruited to the viral replication sites, as evidenced by their colocalization at perinuclear region with viral NS3. Kinetic studies suggest that the component proteins are first released from P-bodies in response to WNV infection within 12 h post-infection, followed by recruitment to the viral replication sites by 24-36 h post-infection. Silencing of the recruited proteins individually with siRNA interfered with viral replication to varying extents suggesting that the recruited proteins are required for efficient viral replication. Thus, the P-body proteins might provide novel drug targets for inhibiting viral infection.

Indexed as

AnimalsAutoantigensCell Line, TumorCricetinaeDEAD-box RNA HelicasesExoribonucleasesGeographic Information SystemsHeLa CellsHumansMicrotubule-Associated ProteinsNucleoside-TriphosphataseProto-Oncogene ProteinsRNA-Binding ProteinsRNA HelicasesRNA InterferenceRNA, Small InterferingAutoantigensDDX3X protein, humanDDX6 protein, humanDEAD-box RNA HelicasesExoribonucleasesLSM1 protein, humanMicrotubule-Associated ProteinsNS3 protein, flavivirusNucleoside-TriphosphataseProto-Oncogene ProteinsRNA-Binding ProteinsRNA HelicasesRNA, Small InterferingSerine EndopeptidasesTNRC6A protein, humanViral Nonstructural ProteinsViral ProteasesXRN1 protein, human

Identifiers

PMID23102969
PMCPMC3545066
OpenAlexW2002332060

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.