Evidence map›Paper›PMID 23100570›Full record

ArticleThe Journal of infectious diseases2013

Radiation-induced cellular and molecular alterations in asexual intraerythrocytic Plasmodium falciparum.

Miranda S Oakley, Noel Gerald, Vivek Anantharaman, Yamei Gao, Victoria Majam, Babita Mahajan, Phuong Thao Pham, Leda Lotspeich-Cole, Timothy G Myers, Thomas F McCutchan and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Science translational medicine · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Miranda S OakleyDivision of Bacterial, Center for Biologics Evaluation and Research, Food and Drug Administration, Rockville, USA.
Noel Gerald
Vivek Anantharaman
Yamei Gao
Victoria Majam
Babita Mahajan
Phuong Thao Pham
Leda Lotspeich-Cole
Timothy G Myers
Thomas F McCutchan
Sheldon L Morris
L Aravind
Sanjai Kumar
National Center for Biotechnology Information · USCenter for Biologics Evaluation and Research · USNational Institutes of Health · US

Funding

Infectious Diseases Research Technologies Core - BethesdaZICAI001051 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI CHERRY, JAMES · 2009 to 2025
$226.1M
Evolutionary Analysis and Comparative Genomics of Protein SuperfamiliesZIALM594244 · NLM · NATIONAL LIBRARY OF MEDICINE · PI ARAVIND, L · 2009 to 2025
$20.3M
6 · The paper itself

Abstract

backgroundγ-irradiation is commonly used to create attenuation in Plasmodium parasites. However, there are no systematic studies on the survival, reversion of virulence, and molecular basis for γ-radiation-induced cell death in malaria parasites.

methodsThe effect of γ-irradiation on the growth of asexual Plasmodium falciparum was studied in erythrocyte cultures. Cellular and ultrastructural changes within the parasite were studied by fluorescence and electron microscopy, and genome-wide transcriptional profiling was performed to identify parasite biomarkers of attenuation and cell death.

resultsγ-radiation induced the death of P. falciparum in a dose-dependent manner. These parasites had defective mitosis, sparse cytoplasm, fewer ribosomes, disorganized and clumped organelles, and large vacuoles-observations consistent with "distressed" or dying parasites. A total of 185 parasite genes were transcriptionally altered in response to γ-irradiation (45.9% upregulated, 54.1% downregulated). Loss of parasite survival was correlated with the downregulation of genes encoding translation factors and with upregulation of genes associated with messenger RNA-sequestering stress granules. Genes pertaining to cell-surface interactions, host-cell remodeling, and secreted proteins were also altered.

conclusionsThese studies provide a framework to assess the safety of γ-irradiation attenuation and promising targets for genetic deletion to produce whole parasite-based attenuated vaccines.

Indexed as

Gamma RaysAnimalsBiomarkersComputational BiologyDose-Response Relationship, RadiationDown-RegulationErythrocytesGene Expression ProfilingGene Expression RegulationHumansMalaria, FalciparumMicroscopy, Electron, TransmissionMicroscopy, FluorescenceMolecular Sequence AnnotationOligonucleotide Array Sequence AnalysisPlasmodium falciparumBiomarkersProtozoan ProteinsRNA, Protozoan

Identifiers

PMID23100570
PMCPMC3523796
OpenAlexW2167507121

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.