Evidence map›Paper›PMID 23096159›Full record

ArticlePlant physiology2013

Influence of host chloroplast proteins on Tobacco mosaic virus accumulation and intercellular movement.

Sumana Bhat, Svetlana Y Folimonova, Anthony B Cole, Kimberly D Ballard, Zhentian Lei, Bonnie S Watson, Lloyd W Sumner, Richard S Nelson

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 96 citations in OpenAlex.

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  6. Nanoplatforms for the Delivery of Nucleic Acids into Plant Cells.International journal of molecular sciences · 2023
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  9. A novel cellular factor ofFrontiers in plant science · 2023
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  10. Article
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  12. Frontiers in plant science · 2022
    Article
  13. Article
  14. Article
  15. Article
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  17. Article
  18. Article
  19. dsRNA Molecules From theFrontiers in plant science · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Sumana BhatPlant Biology Division, The Samuel Roberts Noble Foundation, Inc., Ardmore, Oklahoma 73401, USA.
Svetlana Y Folimonova
Anthony B Cole
Kimberly D Ballard
Zhentian Lei
Bonnie S Watson
Lloyd W Sumner
Richard S Nelson
Noble Research Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tobacco mosaic virus (TMV) forms dense cytoplasmic bodies containing replication-associated proteins (virus replication complexes [VRCs]) upon infection. To identify host proteins that interact with individual viral components of VRCs or VRCs in toto, we isolated viral replicase- and VRC-enriched fractions from TMV-infected Nicotiana tabacum plants. Two host proteins in enriched fractions, ATP-synthase γ-subunit (AtpC) and Rubisco activase (RCA) were identified by matrix-assisted laser-desorption ionization time-of-flight mass spectrometry or liquid chromatography-tandem mass spectrometry. Through pull-down analysis, RCA bound predominantly to the region between the methyltransferase and helicase domains of the TMV replicase. Tobamovirus, but not Cucumber mosaic virus or Potato virus X, infection of N. tabacum plants resulted in 50% reductions in Rca and AtpC messenger RNA levels. To investigate the role of these host proteins in TMV accumulation and plant defense, we used a Tobacco rattle virus vector to silence these genes in Nicotiana benthamiana plants prior to challenge with TMV expressing green fluorescent protein. TMV-induced fluorescent lesions on Rca- or AtpC-silenced leaves were, respectively, similar or twice the size of those on leaves expressing these genes. Silencing Rca and AtpC did not influence the spread of Tomato bushy stunt virus and Potato virus X. In AtpC- and Rca-silenced leaves TMV accumulation and pathogenicity were greatly enhanced, suggesting a role of both host-encoded proteins in a defense response against TMV. In addition, silencing these host genes altered the phenotype of the TMV infection foci and VRCs, yielding foci with concentric fluorescent rings and dramatically more but smaller VRCs. The concentric rings occurred through renewed virus accumulation internal to the infection front.

Indexed as

Chloroplast ProteinsChloroplastsGene SilencingGenetic VectorsGreen Fluorescent ProteinsHost-Pathogen InteractionsNicotianaPhenotypePlant DiseasesPlant LeavesPlant ProteinsPotexvirusProtein Interaction MappingProtein TransportProteomicsRNA-Dependent RNA PolymeraseChloroplast ProteinsGreen Fluorescent ProteinsPlant Proteinsrca protein, plantRNA-Dependent RNA PolymeraseRNA, Messengertobacco mosaic virus replicaseViral Proteins

Identifiers

PMID23096159
PMCPMC3532247
OpenAlexW2105506134

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.