Evidence map›Paper›PMID 23094804›Full record

ArticleJournal of neurotrauma2013

The effect of environmental enrichment on substantia nigra gene expression after traumatic brain injury in rats.

Samuel S Shin, James W Bales, Hong Q Yan, Anthony E Kline, Amy K Wagner, James Lyons-Weiler, C Edward Dixon

Abstract read
In one paragraph

Article in Journal of neurotrauma, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Samuel S ShinBrain Trauma Research Center, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA.
James W Bales
Hong Q Yan
Anthony E Kline
Amy K Wagner
James Lyons-Weiler
C Edward Dixon
University of Pittsburgh · USNeurological Surgery · US

Funding

University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
TBI, Amyloid Metabolism and Statin TherapyP01NS030318 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KOCHANEK, PATRICK M · 2008 to 2010
$3.7M
Dopamine Signaling Mechanisms of Traumatic Brain InjuryR01NS060672 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DIXON, C EDWARD · 2009 to 2013
$1.6M
Environmental Enrichment and Cholinergic Mechanisms after TBIR01NS060005 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KLINE, ANTHONY E. · 2009 to 2013
$1.6M
Transcriptomic Analysis of Therapeutics in Brain TraumaR21NS047919 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DIXON, C EDWARD · 2003 to 2005
$424k
The Effects of Traumatic Brain Injury in Alpha Synuclein and Dopamine RegulationF30NS067731 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SHIN, SAMUEL · 2010 to 2012
$135k
NCATS NIH HHS UL1 TR000005NINDS NIH HHS F30 5F30NS067731-03NINDS NIH HHS P01NS030318NINDS NIH HHS R01NS060005NINDS NIH HHS R01NS060672NINDS NIH HHS R21NS047919
6 · The paper itself

Abstract

Experimental investigations into the effects of traumatic brain injury (TBI) have demonstrated significant alterations in dopaminergic systems. Dopaminergic fibers originating within the substantia nigra and ventral tegmental area (VTA) are important for reward learning, addiction, movement, and behavior. However, little is known about the effect of TBI on substantia nigra and VTA function. Environmental enrichment (EE) has been shown to improve functional outcome after TBI, and a number of studies suggest that it may exert some benefits via dopaminergic signaling. To better understand the role of dopamine in chronic TBI pathophysiology and the effect of EE, we examined the mRNA expression profile within the substantia nigra and VTA at 4 weeks post-injury. Specifically, three comparisons were made: 1) TBI versus sham, 2) sham+EE versus sham+standard (STD) housing, and 3) TBI+EE versus TBI+STD. There were differential expressions of 25, 4, and 40 genes in these comparisons, respectively. Chronic alterations in genes post-injury within the substantia nigra and VTA included genes important for cellular membrane homeostasis and transcription. EE-induced gene alterations after TBI included genes important for signal transduction, in particular calcium signaling pathways, membrane homeostasis, and metabolism. Elucidation of these alterations in gene expression within the substantia nigra and VTA provides new insights into chronic changes in dopamine signaling post-TBI, and the potential role of EE in TBI rehabilitation.

Indexed as

TranscriptomeAnimalsBlotting, WesternBrain InjuriesCalcium SignalingDisease Models, AnimalDopamineEnvironmentHousing, AnimalIn Situ HybridizationMaleMotor ActivityOligonucleotide Array Sequence AnalysisRatsRats, Sprague-DawleyReal-Time Polymerase Chain ReactionDopamineRNA, Messenger

Identifiers

PMID23094804
PMCPMC3579325
OpenAlexW2003139352

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.