Evidence map›Paper›PMID 23093190›Full record

ArticleNature communications2012

Tyrosine sulfation in a Gram-negative bacterium.

Sang-Wook Han, Sang-Won Lee, Ofir Bahar, Benjamin Schwessinger, Michelle R Robinson, Jared B Shaw, James A Madsen, Jennifer S Brodbelt, Pamela C Ronald

Open access · bronzeAbstract read
In one paragraph

Article in Nature communications, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Plant immunity: Rice XA21-mediated resistance to bacterial infection.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  8. Review
  9. Review
  10. Review
  11. TheMicroorganisms · 2021
    Article
  12. Structure and Function of Piezophilic HyperthermophilicInternational journal of molecular sciences · 2021
    Article
  13. Review
  14. Sulfated plant peptide hormones.Journal of experimental botany · 2019
    Review
  15. Article
  16. Article
  17. Biosynthesis and secretion of the microbial sulfated peptide RaxX and binding to the rice XA21 immune receptor.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  18. A Genome-Scale Co-Functional Network ofMolecules and cells · 2019
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Sang-Wook HanDepartment of Plant Pathology and the Genome Center, University of California, One Shields Ave, Davis, California 95616, USA.
Sang-Won Lee
Ofir Bahar
Benjamin Schwessinger
Michelle R Robinson
Jared B Shaw
James A Madsen
Jennifer S Brodbelt
Pamela C Ronald
The University of Texas at Austin · USUniversity of California, Davis · USKyung Hee University · KR

Funding

Receptor Kinase-Mediated Signaling in the Innate Immune ResponseR01GM055962 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI RONALD, PAMELA C · 1999 to 2013
$2.9M
UV Photodissociation for Acidic and Basic Proteome CharacterizationR21GM099028 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI BRODBELT, JENNIFER S. · 2011 to 2012
$384k
NIGMS NIH HHS 2-R01-GM055962-09NIGMS NIH HHS R01 GM055962NIGMS NIH HHS R21 GM099028
6 · The paper itself

Abstract

Tyrosine sulfation, a well-characterized post-translation modification in eukaryotes, has not previously been reported in prokaryotes. Here, we demonstrate that the RaxST protein from the Gram-negative bacterium, Xanthomonas oryzae pv. oryzae, is a tyrosine sulfotransferase. We used a newly developed sulfotransferase assay and ultraviolet photodissociation mass spectrometry to demonstrate that RaxST catalyses sulfation of tyrosine 22 of the Xoo Ax21 (activator of XA21-mediated immunity) protein. These results demonstrate a previously undescribed post-translational modification in a prokaryotic species with implications for studies of host immune responses and bacterial cell-cell communication systems.

Indexed as

Enzyme AssaysPhotoelectron SpectroscopyProtein Processing, Post-TranslationalSubstrate SpecificitySulfotransferasesTyrosineXanthomonasSulfotransferasesTyrosine

Identifiers

PMID23093190
PMCPMC4305400
OpenAlexW2086059046

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.